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Quan (Andy) Gan 0d878ff8ef [Example] Cleaned GraphSAGE node classification example with PyTorch Lightning (#3863)
* cleaned pl node classification example

* conform to PL's method of updating the dataloader

* update

* lint

* fix test

* fix
2022-04-12 17:26:23 +08:00

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Inductive Representation Learning on Large Graphs (GraphSAGE)
============
- Paper link: [http://papers.nips.cc/paper/6703-inductive-representation-learning-on-large-graphs.pdf](http://papers.nips.cc/paper/6703-inductive-representation-learning-on-large-graphs.pdf)
- Author's code repo: [https://github.com/williamleif/graphsage-simple](https://github.com/williamleif/graphsage-simple). Note that the original code is
simple reference implementation of GraphSAGE.
Advanced usages, including how to run pure GPU sampling, how to train with PyTorch Lightning, etc., are in the `advanced` directory.
Requirements
------------
```bash
pip install requests torchmetrics
```
Results
-------
### Full graph training
Run with following (available dataset: "cora", "citeseer", "pubmed")
```bash
python3 train_full.py --dataset cora --gpu 0 # full graph
```
* cora: ~0.8330
* citeseer: ~0.7110
* pubmed: ~0.7830
### Minibatch training for node classification
Train w/ mini-batch sampling for node classification on OGB-products:
```bash
python3 node_classification.py
python3 multi_gpu_node_classification.py
```
### PyTorch Lightning for node classification
Train w/ mini-batch sampling for node classification with PyTorch Lightning on OGB-products.
Works with both single GPU and multiple GPUs:
```bash
python3 lightning/node_classification.py
```
### Minibatch training for link prediction
Train w/ mini-batch sampling for link prediction on OGB-Citation2:
```bash
python3 link_pred.py
```