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hgalioulline 6c7c403914 [Feature] Filtered MRR metrics for R-GCN example (#1298)
* Add filtered metrics for R-GCN example

* Add new line to end of file

* Add evaluation protocol argument option for R-GCN example

* Update README

Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
2020-03-13 16:25:03 +08:00

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# Relational-GCN
* Paper: [https://arxiv.org/abs/1703.06103](https://arxiv.org/abs/1703.06103)
* Author's code for entity classification: [https://github.com/tkipf/relational-gcn](https://github.com/tkipf/relational-gcn)
* Author's code for link prediction: [https://github.com/MichSchli/RelationPrediction](https://github.com/MichSchli/RelationPrediction)
### Dependencies
* PyTorch 0.4.1+
* requests
* rdflib
* pandas
```
pip install requests torch rdflib pandas
```
Example code was tested with rdflib 4.2.2 and pandas 0.23.4
### Entity Classification
AIFB: accuracy 97.22% (DGL), 95.83% (paper)
```
python3 entity_classify.py -d aifb --testing --gpu 0
```
MUTAG: accuracy 75% (DGL), 73.23% (paper)
```
python3 entity_classify.py -d mutag --l2norm 5e-4 --n-bases 30 --testing --gpu 0
```
BGS: accuracy 82.76% (DGL), 83.10% (paper)
```
python3 entity_classify.py -d bgs --l2norm 5e-4 --n-bases 40 --testing --gpu 0 --relabel
```
AM: accuracy 87.37% (DGL), 89.29% (paper)
```
python3 entity_classify.py -d am --n-bases=40 --n-hidden=10 --l2norm=5e-4 --testing
```
### Link Prediction
FB15k-237: MRR 0.151 (DGL), 0.158 (paper)
```
python3 link_predict.py -d FB15k-237 --gpu 0 --raw
```
FB15k-237: Filtered-MRR 0.2044
```
python3 link_predict.py -d FB15k-237 --gpu 0 --filtered
```