提交

325 次代码提交

作者 SHA1 备注 提交日期
Minjie Wang af23c45726 [Release] update version (#297)
* update version; add news.md; modify contributing.md

* change urls to dmlc
v0.1.3
2018-12-11 15:40:51 -05:00
Lingfan Yu f896e49031 [Doc] fix link in README (#296)
* fix mxnet link

* fix issue link
2018-12-11 14:48:49 -05:00
Haibin Lin d10baaeff6 [DOC] Fix repo link (#295)
* Update index.rst

* Update index.rst
2018-12-11 14:41:15 -05:00
Da Zheng 18ed7868fe [Doc] update neighbor sampler doc. (#287) 2018-12-11 12:48:22 -05:00
Minjie Wang 597ac7f8b5 [Release] v0.1.3 (#288)
* 0.1.2 release

* oops

* more fixes on windows

* [Bugfix] fix download dir (#275)

* fix download dir

* add doc for the env var

* windows 7 -> 10

* doc update

* [Bugfix] Fix conversion from networkx (#286)

* fix from_nx when no edge id available

* add test cases

* more detailed tests

* more comments

* [Bugfix] Switch to sparse_coo_matrix for torch 1.0+ (#282)

* switch to sparse_coo_matrix for torch 1.0+

* fix bug when the version is 0.4.1.post2

* change to distutils
2018-12-11 01:30:47 -05:00
Zihao Ye 8bc01c6309 [Tutorial] Tutorial fix (SSE link & Transformer) (#285)
* upd tutorial

* upd tutorial
2018-12-10 11:26:19 -05:00
Gan Quan 322bd713e4 [Release] 0.1.2: Require Windows 10 (#277)
* 0.1.2 release

* oops

* more fixes on windows

* [Bugfix] fix download dir (#275)

* fix download dir

* add doc for the env var

* windows 7 -> 10

* doc update
2018-12-07 04:46:21 -05:00
Zihao Ye 9f32554296 [Model]Transformer (#186)
* change the signature of node/edge filter

* upd filter

* Support multi-dimension node feature in SPMV

* push transformer

* remove some experimental settings

* stable version

* hotfix

* upd tutorial

* upd README

* merge

* remove redundency

* remove tqdm

* several changes

* Refactor

* Refactor

* tutorial train

* fixed a bug

* fixed perf issue

* upd

* change dir

* move un-related to contrib

* tutuorial code

* remove redundency

* upd

* upd

* upd

* upd

* improve viz

* universal done

* halt norm

* fixed a bug

* add draw graph

* fixed several bugs

* remove dependency on core

* upd format of README

* trigger

* trigger

* upd viz

* trigger

* add transformer tutorial

* fix tutorial

* fix readme

* small fix on tutorials

* url fix in readme

* fixed func link

* upd
v0.1.2
2018-12-07 15:22:46 +08:00
Gan Quan 37feb479fd [Release] 0.1.2 updates (#276)
* 0.1.2 release

* oops

* more fixes on windows

* [Bugfix] fix download dir (#275)

* fix download dir

* add doc for the env var
2018-12-07 01:54:13 -05:00
Minjie Wang 3564fdc5f1 [Bugfix][Model] fix treelstm model (#274)
* fix bug after moving batcher out of dgl.data

* disable mx utest
2018-12-06 23:52:50 -05:00
Da Zheng f491d6b9e7 [Readme] add an M. (#273) 2018-12-06 22:41:45 -05:00
Da Zheng c0d1f8e43b small fixes in the immutable graph index. (#271)
* small fix in immutable graph index.

* minor fix.
2018-12-06 19:01:14 -08:00
Sheng Zha f720ce13e1 [Build] support universal wheel on linux (#272) 2018-12-06 18:06:58 -05:00
Mufei Li ddf96ff9e7 [Doc] Fix DGMG part in README (#270)
* Fix DGMG epoch time

* Fix README for DGMG

* update
2018-12-06 10:54:07 -05:00
Da Zheng 1bbc885b40 move batcher to examples. (#269)
* move pytorch code to examples.

* fix.

* fix tutorial
2018-12-06 06:45:27 -08:00
Da Zheng 7aa494b3bc [Bugfix][Doc] explain the batch dimension in the doc and many fix (#266)
* add more unit tests for mxnet.

* fix.

* explain the batch dimension.

* update doc.

* disable unit tests on DFS.

* fix graph traversal.
2018-12-06 00:48:57 -05:00
Gan Quan ac660f45ef [Doc] Readme (#265)
* [Doc] updated readme

* contribution guide change

* small edits

* add perf #

* Update README.md

* Update README.md

* add others...

* rewrite scalability

* model & code links

* some note for treelstm

* rewrite scalability
2018-12-06 00:31:04 -05:00
Minjie Wang 970f15ec74 [Release] simplify the pr template a little (#268) 2018-12-05 23:15:39 -05:00
Minjie Wang 612a7fb996 [Release] setup version (#264) 2018-12-05 19:33:06 -05:00
Minjie Wang c620bfc2b7 [Doc] faq & env (#263)
* faq & env

* add update version script; 0.0.1 -> 0.1.0
2018-12-05 19:18:33 -05:00
VoVAllen 82c4df4118 [Issue & PR Template] Add Issue Template & PR Template & Contribution Guide (#192)
* add issue template

* add contribution guide and PR Template, adapted from mxnet

* fix typo
2018-12-05 18:20:59 -05:00
Da Zheng 063ed69cdf [BUGFIX] fix a bug in creating immutable graph index. (#251)
* fix a bug in creating immutable graph index.

* fix for new changes in the backend API.

* fix for creating immutable graph index from coo matrix.

* retrigger
2018-12-05 17:51:50 -05:00
Minjie Wang 2194b7dfa6 [Bugfix] edge order is not preserved when converting from edge list (#262) 2018-12-05 17:41:26 -05:00
Lingfan Yu a1d50f0f53 [Refactor] Rename before release (#261)
* include/dgl/runtime

* include

* src/runtime

* src/graph

* src/scheduler

* src

* clean up CMakeLists

* further clean up in cmake

* install commands

* python/dgl/_ffi/_cython

* python/dgl/_ffi/_ctypes

* python/dgl/_ffi

* python/dgl

* some fix

* copy right
2018-12-05 16:45:36 -05:00
Da Zheng aabba9d4d9 [Doc] minor fix in overview (#256) 2018-12-05 16:27:52 -05:00
VoVAllen cd907cddfa [Tutorial] Add sse tutorial & MXNet Tutorial CI (#252)
* add sse tutorial

* add mxnet tutorial ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* Fix ci

* Fix ci

* Fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* Fix CI

Fix CI image

* permission fix

* fix a bug in the code.

* small fix

* fix doc

* fix ci

* shorten the iters

* fix

* remove extra file

* add load_backend api to dynamically switch to another backend

* try fix

* fix tutorial

* fix tutorial

* fix bug in tutorial
2018-12-05 16:21:44 -05:00
Lingfan Yu f4a9a455f5 [Doc] Fix hyperlink in tutorial of tutorals (#260)
* fix all code tutorial links and typos in texts

* sse readme format

* fix

* sse paper link

* gat readme

* fix
2018-12-05 15:04:27 -05:00
Minjie Wang e557ed89ff [Doc][Model] example folder doc and model summary (#259)
* update example readme

* mx example readme

* add results in readme

* mx rgcn readme
2018-12-05 14:35:14 -05:00
Da Zheng 899d125bb1 Add tests for MXNet and throw NotImplementedError if not implemented (#258)
* add more unit tests for mxnet.

* fix.
2018-12-05 10:41:33 -08:00
Yizhi Liu 2c5b48ab60 [Model][MXNet] RGCN Entity Classification (#246)
* entity classify work for examples

* add loop_msg

* remove wrong assert

* remove one reshape

* add readme

* add MRR

* remove mrr from entity task
2018-12-05 10:27:59 -08:00
Da Zheng 7c7cc7e0c2 [sampler] Adjust the sampler API for the future extension. (#243)
* return seed ids.

* fix tests.

* implement.
2018-12-05 10:05:10 -08:00
Da Zheng 40506ecc20 use openmp to accelerate nid mapping (#242)
* use openmp.

* update cmake.
2018-12-05 09:55:59 -08:00
Lingfan Yu 378c264561 [Model] Fix GCN Normalization (#249)
* WIP

* lr -> 0.01

* new cora dataset

* normalization code

* minor format change

* normalization factor for deg bucket
2018-12-05 12:32:10 -05:00
Minjie Wang 21255b6528 [Bugfix] tolist and dependencies in dgl.data (#239)
* change Index.tolist -> Index.tonumpy; fix bug in traversal; remove dependencies in data

* fix import

* fix __all__ and some docstring
2018-12-05 12:20:59 -05:00
Minjie Wang eafcb7e7f5 [Bugfix][MXNet] Fix edge order and builtin max bug in mx (#247)
* Fix edge order and builtin max bug in mx

* fix as requested
2018-12-05 01:32:54 -08:00
VoVAllen 71fa26acac Fix windows line seprator problems (#248) 2018-12-05 15:40:32 +08:00
Lingfan Yu 274e1082f5 [Doc] API doc string for many components (#245)
* builtin function docstring

* init docstring

* view docstring

* add init to index and fix

* node /edge feature

* Example -> Examples

* fix func hyperlink

* traversal

* fix

* from/to_networkx docstring

* minor

* fix duplicate label

* comment about tensor framework

* from scipy sparse matrix

* fix format errors
2018-12-04 17:52:00 -05:00
Mufei Li 7cca500787 [Doc] Computing with DGLGraph (#212)
* Docs for graph computing

* Docs for graph computing

* Fix

* WIP

* update the docstring
2018-12-04 16:51:46 -05:00
Da Zheng c99f423718 [Sampler] extend sampler (#238) 2018-12-04 16:46:26 -05:00
Lingfan Yu 455ea48570 [Bugfix] Conversion between networkx and DGLGraph (#244)
* copy feature to networkx

* fix to_network for multi-graph

* test case for nx conversion

* iterate over Index returns plain int instead of numpy.int64

* fix from_network multi-edge bug
2018-12-04 16:19:11 -05:00
VoVAllen 31800e7170 [Doc] Fix typo at doc index (#241)
Fix typo at doc index
2018-12-04 15:05:37 -05:00
Da Zheng a5a35d1f7a [Sampler] improve random shuffle performance in sampler (#228)
* fix.

* make it generic.

* add the API.

* fix.

* remove mxnet.
2018-12-04 09:24:32 -08:00
Da Zheng 78269cedfd [Doc] Update GCN README.md (#224)
* update readme.

* update readme
2018-12-04 12:07:05 -05:00
VoVAllen 16cc528757 [Doc] Improve Capsule with Jinyang & Fix wrong tutorial level layout (#236)
* improve capsule tutorial with jinyang

* fix wrong layout of second-level tutorial

* delete transformer
2018-12-04 10:46:49 -05:00
Da Zheng dafe46710b [Bug][MXNet] fix an API in immutable graph index. (#233) 2018-12-04 00:37:18 -05:00
HQ b1e8d95e99 [Doc] LGNN tutorial (#210)
* tutorial notebook added

* lg tutorial cleaned up

* dataset scaffold

* move dataloader to data

* fix model

* remove todo

* utils seperated

* [model]line graph new implementation + tutorial + binary sub graph dataset

* [tutorial] line graph sphinx scaffold

* [tutorial] lgnn tutorial improved

* [tutorial] remove notebook

* [tutorial] fix lg and gcn links

* [tutorial] fix random seed

* [tutorial]fix

* WIP

* code refactor done

* new mini dataset; remove utils code

* fix

* word fix

* fix link

* minor fix

* minor fix

* minor fix
2018-12-03 17:59:50 -05:00
Minjie Wang 10e18ed982 [Doc] overview and others (#222)
* model tutorials overview

* update the 1_first

* revised overview and summarized "what is DGL" in glance
2018-12-03 17:31:35 -05:00
Da Zheng 2c170a8c17 [Graph][Bugfix] Fix the API of map_to_subgraph_nid (#226)
* correct vid mapping API.

* fix sse.
2018-12-03 17:16:35 -05:00
Gan Quan 419ffbded9 [Doc] Installation guide (#223)
* docstrings for graph mutation & queries

* [Doc] contrib.sampler. (#200)

* subgraph docs

* updates

* added installation guide

* style fix

* package name fixes

* adding it back...

* fix as requested

* adding link

* mac os build instructions

* OS -> macOS
2018-12-03 14:33:21 -05:00
Lingfan Yu b0c76d48be [Bug] fix __slots__ in view.py (#230) 2018-12-03 13:28:22 -05:00