40caf1ab50
[HeteroGraph] Fix the failure of apply_nodes when the input function changes feature size for all nodes ( #2223 )
...
* Fix
* Fix
2020-09-24 08:54:28 +08:00
f3f646bbfd
[Doc and User Guide] Minor Fix ( #2205 )
...
* Fix doc and user guide
* Update heterograph.py
Co-authored-by: Ubuntu <ubuntu@ip-172-31-13-9.us-west-2.compute.internal >
2020-09-17 03:01:12 +08:00
7d8522a29f
[Bug] fix cumsum on an empty array with prepend_zero returning an empty array ( #2179 )
...
* fix cumsum
* udp
Co-authored-by: Zihao <expye@outlook.com >
2020-09-11 18:23:44 +08:00
ac570c1dae
[Bugfix] Fix flatten not wrapping unit graph ( #2170 )
...
* fix flatten not wrapping unit graph
* fix doc
2020-09-10 17:41:52 +08:00
9eaace9216
rename create_format_ to create_formats_ ( #2126 )
2020-08-29 22:49:27 +08:00
b2ac89f2e4
[Bugfix] Fix #2076 ( #2111 )
...
* Fix
* Revert "Fix"
This reverts commit 2627630daee33a709a70ef87e1ad9930772430a8.
* Fix
* upd
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal >
2020-08-27 00:23:31 +08:00
bcff14ccde
[Dco] Remove preface in guide ( #2096 )
...
* fix
* fix
2020-08-23 10:27:15 +08:00
f13b9b6212
[Doc] Scan the API docs and make many changes ( #2080 )
...
* WIP: api
* dgl.sampling, dgl.data
* dgl.sampling; dgl.dataloading
* sampling packages
* convert
* subgraph
* deprecate
* subgraph APIs
* All docstrings for convert/subgraph/transform
* almost all funcs under dgl namespace
* WIP: DGLGraph
* done graph query
* message passing functions
* lint
* fix merge error
* fix test
* lint
* fix
Co-authored-by: Quan Gan <coin2028@hotmail.com >
2020-08-20 23:26:49 +08:00
9088c63592
[Feature] Change the Default Value of transpose in DGLGraph.adj ( #2046 )
...
* Update adj
* Fix
2020-08-18 22:45:46 +08:00
be444e52d9
[Doc/Feature] Refactor, doc update and behavior fix for graphs ( #1983 )
...
* Update graph
* Fix for dgl.graph
* from_scipy
* Replace canonical_etypes with relations
* from_networkx
* Update for hetero_from_relations
* Roll back the change of canonical_etypes to relations
* heterograph
* bipartite
* Update doc
* Fix lint
* Fix lint
* Fix test cases
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix test
* Fix
* Update
* Use DGLError
* Update
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* rewrite sanity checks
* delete unnecessary checks
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Update
* Fix
* Update
* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
Co-authored-by: Quan Gan <coin2028@hotmail.com >
2020-08-18 04:26:29 +08:00
5e34ca8bb5
[Feature] Lazy copy ndata, edata to device ( #1986 )
...
* Lazy to device
* remove print
* lint
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* lint
* Fix
* Revert "Fix"
This reverts commit 615c9b8f80f5f6ee2ab43c849a22f0083deedf3b.
* Add test for frame lazy update
* disable tensorflow
* upd
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-08-12 13:04:47 +08:00
22167f7203
[Refactor] Enable new kernel in all message passing APIs ( #1953 )
...
* WIP: frame refactor
* new frame
* simple update_all builtin
* move all subgraph routines into the same file
* sddmm & spmm schedule; node & edge udf
* degree bucketing
* some tricky 0deg corner cases
* bug in frame append
* merge test_hetero_basics and test_basics
* some code rearange
* fix test_heterograph
* add mean spmm
* enable all builtin combinations
* pass gpu test
* pass pytorch tests
* wip
* fix some pt debugging codes
* fix bug in mxnet backward
* pass all mxnet utests
* passed tf tests
* docstring
* lint
* lint
* fix broadcasting bugs
* add warning and clamp for mean reducer
* add test for zero-degree mean
* address comments
* lint
* small fix
2020-08-07 15:40:25 +08:00
f4608c2227
[CUDA][Kernel] A bunch of int64 kernels for COO and CSR ( #1883 )
...
* COO sort
* COOToCSR
* CSR2COO
* CSRSort; CSRTranspose
* pass all CSR tests
* lint
* remove int32 conversion
* fix tensorflow nn tests
* turn on CI
* fix
* addreess comments
2020-07-30 21:02:07 +08:00
444becf00a
[Misc] Move many deprecated codes to the deprecate folder ( #1893 )
...
* some file movements
* move some codes to deprecated
* more deprecation
* lint
* remove useless test
2020-07-30 18:17:33 +08:00
68a978d4de
[Model] Fixes JTNN for 0.5 ( #1879 )
...
* jtnn and fixes
* make metagraph a method
* fix test
* fix
2020-07-30 13:36:08 +08:00
3e2f94ed20
[Distributed] Refactor distributed training to new DGLGraph. ( #1874 )
...
* fix tests in partition.
* fix DistGraph.
* fix without shared memory.
* fix sampling.
* enable distributed test.
* fix tests.
* fix a bug in shared-mem heterograph.
* print better error messages.
* fix.
* don't specify formats.
* fix.
* fix
* small fix.
2020-07-28 22:07:24 -07:00
40950629b2
[Feature] Shared memory utilities ( #1807 )
...
* update
* update
* update
* update
* fix
* update
* fix
* update
* update
* win32
* update
* fix
* update
* update
* update
* updat
* update
* update
* fix
* update
* update
* update
* update
* update
* fix
* TODO
* 111
* fix
* minor fix
* minor fix
* fox
* Update shared_mem_manager.cc
* update
* update
* update
* update metis
* update metis
* update
Co-authored-by: VoVAllen <jz1749@nyu.edu >
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
2020-07-28 15:26:15 +08:00
1c1bb77231
hot fix ( #1871 )
...
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal >
2020-07-28 14:46:27 +08:00
44089c8b4d
[Refactor][Graph] Merge DGLGraph and DGLHeteroGraph ( #1862 )
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* Merge
* [Graph][CUDA] Graph on GPU and many refactoring (#1791 )
* change edge_ids behavior and C++ impl
* fix unittests; remove utils.Index in edge_id
* pass mx and th tests
* pass tf test
* add aten::Scatter_
* Add nonzero; impl CSRGetDataAndIndices/CSRSliceMatrix
* CSRGetData and CSRGetDataAndIndices passed tests
* CSRSliceMatrix basic tests
* fix bug in empty slice
* CUDA CSRHasDuplicate
* has_node; has_edge_between
* predecessors, successors
* deprecate send/recv; fix send_and_recv
* deprecate send/recv; fix send_and_recv
* in_edges; out_edges; all_edges; apply_edges
* in deg/out deg
* subgraph/edge_subgraph
* adj
* in_subgraph/out_subgraph
* sample neighbors
* set/get_n/e_repr
* wip: working on refactoring all idtypes
* pass ndata/edata tests on gpu
* fix
* stash
* workaround nonzero issue
* stash
* nx conversion
* test_hetero_basics except update routines
* test_update_routines
* test_hetero_basics for pytorch
* more fixes
* WIP: flatten graph
* wip: flatten
* test_flatten
* test_to_device
* fix bug in to_homo
* fix bug in CSRSliceMatrix
* pass subgraph test
* fix send_and_recv
* fix filter
* test_heterograph
* passed all pytorch tests
* fix mx unittest
* fix pytorch test_nn
* fix all unittests for PyTorch
* passed all mxnet tests
* lint
* fix tf nn test
* pass all tf tests
* lint
* lint
* change deprecation
* try fix compile
* lint
* update METIDS
* fix utest
* fix
* fix utests
* try debug
* revert
* small fix
* fix utests
* upd
* upd
* upd
* fix
* upd
* upd
* upd
* upd
* upd
* trigger
* +1s
* [kernel] Use heterograph index instead of unitgraph index (#1813 )
* upd
* upd
* upd
* fix
* upd
* upd
* upd
* upd
* upd
* trigger
* +1s
* [Graph] Mutation for Heterograph (#1818 )
* mutation add_nodes and add_edges
* Add support for remove_edges, remove_nodes, add_selfloop, remove_selfloop
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
* upd
* upd
* upd
* fix
* [Transfom] Mutable transform (#1833 )
* add nodesy
* All three
* Fix
* lint
* Add some test case
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* fix
* triger
* Fix
* fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
* [Graph] Migrate Batch & Readout module to heterograph (#1836 )
* dgl.batch
* unbatch
* fix to device
* reduce readout; segment reduce
* change batch_num_nodes|edges to function
* reduce readout/ softmax
* broadcast
* topk
* fix
* fix tf and mx
* fix some ci
* fix batch but unbatch differently
* new checkk
* upd
* upd
* upd
* idtype behavior; code reorg
* idtype behavior; code reorg
* wip: test_basics
* pass test_basics
* WIP: from nx/ to nx
* missing files
* upd
* pass test_basics:test_nx_conversion
* Fix test
* Fix inplace update
* WIP: fixing tests
* upd
* pass test_transform cpu
* pass gpu test_transform
* pass test_batched_graph
* GPU graph auto cast to int32
* missing file
* stash
* WIP: rgcn-hetero
* Fix two datasety
* upd
* weird
* Fix capsuley
* fuck you
* fuck matthias
* Fix dgmg
* fix bug in block degrees; pass rgcn-hetero
* rgcn
* gat and diffpool fix
also fix ppi and tu dataset
* Tree LSTM
* pointcloud
* rrn; wip: sgc
* resolve conflicts
* upd
* sgc and reddit dataset
* upd
* Fix deepwalk, gindt and gcn
* fix datasets and sign
* optimization
* optimization
* upd
* upd
* Fix GIN
* fix bug in add_nodes add_edges; tagcn
* adaptive sampling and gcmc
* upd
* upd
* fix geometric
* fix
* metapath2vec
* fix agnn
* fix pickling problem of block
* fix utests
* miss file
* linegraph
* upd
* upd
* upd
* graphsage
* stgcn_wave
* fix hgt
* on unittests
* Fix transformer
* Fix HAN
* passed pytorch unittests
* lint
* fix
* Fix cluster gcn
* cluster-gcn is ready
* on fixing block related codes
* 2nd order derivative
* Revert "2nd order derivative"
This reverts commit 523bf6c249bee61b51b1ad1babf42aad4167f206.
* passed torch utests again
* fix all mxnet unittests
* delete some useless tests
* pass all tf cpu tests
* disable
* disable distributed unittest
* fix
* fix
* lint
* fix
* fix
* fix script
* fix tutorial
* fix apply edges bug
* fix 2 basics
* fix tutorial
Co-authored-by: yzh119 <expye@outlook.com >
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-7-42.us-west-2.compute.internal >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal >
2020-07-28 14:30:41 +08:00
ec2e24be6d
[Feature] Slice dstnode features in NN modules ( #1838 )
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* slice dstdata from srcdata within nn module
* a bunch of fixes
* add comment
* fix gcmc layer
* repr for blocks
* fix
* fix context
* fix
* do not copy internal columns
* docstring
2020-07-25 21:57:49 +08:00
200340ab38
[Transform] Reverse for heterogenous graph ( #1784 )
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* reverse
* Add more test
* Fix lint
* Fix
* move to transform
* upd
* upd
* upd
* Add more test
* lint
* Fix
* Fix doc
* Fix
* test
* doc
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-07-13 18:05:44 +08:00
8a183e3fcb
[BugFix] Fix #1779 ( #1781 )
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* Fix bug #1779
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-07-10 17:35:23 +08:00
168a88e570
[Sampling] NodeDataLoader for node classification ( #1635 )
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* neighbor sampler data loader first commit
* more commit
* nodedataloader
* fix
* update RGCN example
* update OGB
* fixes
* fix minibatch RGCN crashing with self loop
* reverting gatconv test code
* fix
* change to new solution that doesn't require tf dataloader
* fix
* lint
* fix
* fixes
* change doc
* fix docstring
* docstring fixes
* return seeds and input nodes from data loader
* fixes
* fix test
* fix windows build problem
* add pytorch wrapper
* fixes
* add pytorch wrapper
* add unit test
* add -1 support to sample_neighbors & fix docstrings
* docstring fix
* lint
* add minibatch rgcn evaluations
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Tong He <hetong007@gmail.com >
2020-07-02 16:31:05 +08:00
18a26fcfb1
[Data] Support HeteroGraph save/load ( #1526 )
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* 111
* add history version test
* fix
* 111
* save
* ``
* fix1
* 111
* add save heterograph
* lint
* lint
* add tests
* minor fix
* fix
* docs
* add format tets
* use unique_ptr
* fix
* fix interface
* 111
* 111
* fix
* lint
* fix
* add support to s3
* fix
* fix
* fix leak
* fix
* fix docs
* fix
* linlt
* fix
* fix
* fix
* address comment
* address comment
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
2020-06-30 13:34:50 +08:00
55072b4e83
[Feature] dgl.subgraph support Bool mask tensor as index. ( #1709 )
...
* dgl.subgraph support using Bool mask tensor
* support numpy boo tensor and add some test
* Update
* Fix docstring
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-06-28 22:08:04 +08:00
b742c559fe
[Feature]heterograph.edata and heterograph.ndata support multiple ntype and etype ( #1673 )
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* g.edata and g.ndata support multiple ntype and etype
* Add test case
* support g.srcdata and g.dstdata
* Fix test
* lint
* Fix
* Fix some comments
* lint
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
Co-authored-by: Mufei Li <mufeili1996@gmail.com >
2020-06-26 21:11:22 +08:00
f1b19a6b67
[CUDA] Many CUDA operators; Prepare for DGLGraph on CUDA ( #1660 )
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* add cuda utils; change g.to; add g.device
* split array.h into several headers
* cuda index select
* file
* three cuda kernels
* add cuda elementwise arith and several others
* cuda CSRIsNonZero
* fix lint
* lint
* lint
* fix bug in changing ctx to property
* address comments
* remove unused codes
* address comments
2020-06-19 15:44:42 +08:00
0a4e8b32b6
[Optimization] Optimize pickling of heterograph ( #1570 )
...
* update
* update
* update
* update
* update
* update
* backward compatibility
* update
* update
* update
* update
* update
* test
* test
* update
* update
* update
* update
* update
* update
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
2020-06-18 19:43:42 +08:00
3e72c53ae0
[Bug?] Fix #1563 ( #1642 )
2020-06-15 22:00:21 +08:00
04522a76c6
[bugfix] Quick fix of #1547 ( #1600 )
...
* upd
* upd
2020-06-15 09:27:37 +08:00
fe207b4564
[HeteroGraph] Improve Error Messages for find_edges ( #1626 )
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* Improve error message
* Fix
* Fix
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
2020-06-11 21:29:47 +08:00
70dc2ee9c6
[Feature] Add a request_format api and enrich related docstring. ( #1528 )
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* upd
* upd
* lint
* fix
* bloody lint
2020-05-16 01:17:06 +08:00
20ec7bb0d9
[Bug?] Fixing compatibility of pickles across DGL versions ( #1507 )
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* pickle compatibility before 0.4.2
* fixing for utils.Index
* add TODOs
* fix
* fix
* more compatibility checks for DGLGraph and DGLHeteroGraph objects
* lint
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-05-15 00:02:58 +08:00
c2e61ce10b
[Refactor] Restrict sparse format for DGLHeteroGraph ( #1474 )
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* upd
* simplify
* further simplify
* lint
* doc
* upd
* upd
* upd
* upd
* upd
* upd
* upd
* lint
* rename format
* upd
* lint
* upd
* upd
* upd
* udp
* debug
* upd
* upd
* upd
* upd
* upd
* 无可厚非吧
* 中三边肥
* 你一定要喊吗
* lint
* upd
* upd
* upd
* upd
* upd
* upd
* upd
* Update unit_graph.h
Co-authored-by: Zihao Ye <yzh119@192.168 .0.110>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com >
2020-05-14 22:11:12 +08:00
dc8ca88e58
[Refactor] Explicit dtype for HeteroGraph ( #1467 )
...
* 111
* 111
* lint
* lint
* lint
* lint
* fix
* lint
* try
* fix
* lint
* lint
* test
* fix
* ttt
* test
* fix
* fix
* fix
* mxnet
* 111
* fix 64bits computation
* pylint
* roll back
* fix
* lint
* fix hetero_from_relations
* remove index_dtype in to_homo and to_hetero
* fix
* fix
* fix
* fix
* remove default
* fix
* lint
* fix
* fix error message
* fix error
* lint
* macro dispatch
* try
* lint
* remove nbits
* error message
* fix
* fix
* lint
* lint
* lint
* fix
* lint
* fix
* fix random walk
* lint
* lint
* fix
* fix
* fix
* lint
* fix
* lint
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-05-08 14:26:28 +08:00
f25bc176d0
[Hetero] Improve speed of several Hetero APIs ( #1486 )
...
* add clone function to frame
* add utest
* replace all local_var with local_scope
* fix utest
* avoid creating canonical types in __getitem__
* lint
* try another utest appraoch for mx
* utest
2020-05-01 15:21:33 +08:00
af61e2fbb4
[Feature] Support nn modules for bipartite graphs. ( #1392 )
...
* init gat
* fix
* gin
* 7 nn modules
* rename & lint
* upd
* upd
* fix lint
* upd test
* upd
* lint
* shape check
* upd
* lint
* address comments
* update tensorflow
Co-authored-by: Quan Gan <coin2028@hotmail.com >
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-03-29 16:48:38 +08:00
67cb7a43a0
[Feature] Deprecate multigraph ( #1389 )
...
* Deprecate multi-graph
* Handle heterograph and edge_ids
* lint
* Fix
* Remove multigraph in C++ end
* Fix lint
* Add some test and fix something
* Fix
* Fix
* upd
* Fix some test case
* Fix
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-03-28 21:31:24 +08:00
3efb5d8ecf
[NN] Add HeteroGraphConv module for cleaner module definition ( #1385 )
...
* Add HeteroGraphConv
* add custom aggregator; some docstring
* debugging
* rm print
* fix some acc bugs
* fix initialization problem in weight basis
* passed tests
* lint
* fix graphconv flag; add error message
* add mxnet heteroconv
* more fix for mx
* lint
* fix torch cuda test
* fix mx test_nn
* add exhaust test for graphconv
* add tf heteroconv
* fix comment
2020-03-27 18:47:06 +08:00
0f40c6e49c
[Hetero] Replace card with num_nodes
...
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-03-20 16:56:53 +08:00
4af02022b2
[Bug] Multiple fixes ( #1374 )
...
* multiple fixes
* lint
* lint x2
2020-03-19 11:19:44 +08:00
0a51dc5435
[Bug] Fix dsttype in GraphSAGE minibatch model ( #1371 )
...
* fix for new ntype API for blocks
* adding two new interfaces
2020-03-18 23:57:03 +08:00
6111ea4665
[Model] RGCN mini-batch training; Better bipartite graph support ( #1337 )
...
* change the model to use node embedding only
* minibatch training
* add readme
* small fix
* backward-compatible
* backward compatible
* modify to_block; rgcn changed
* fix
* fix transform
* fix bug in unittest script
* docstring
* fix lint
* add tests
* address comments; fix offline eval
* gitignore
2020-03-16 18:58:06 +08:00
a9520f71ce
[Model][Sampler] GraphSAGE model, bipartite graph conversion & remove edges API ( #1297 )
...
* remove edge and to bipartite and graphsage with sampling
* fixes
* fixes
* fixes
* reenable multigpu training
* fixes
* compatibility in DGLGraph
* rename to compact_as_bipartite
* bugfix
* lint
* add offline inference
* skip GPU tests
* fix
* addresses comments
* fix
* fix
* fix
* more tests
* more docs and unit tests
* workaround for empty slice on empty data
2020-03-08 02:38:29 +08:00
ce6e19f233
[Bugfix] Allows node types with no inbound/outbound edges ( #1323 )
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* add num nodes in ctors
* fix
* lint
* addresses comments
* replace with constexpr
* remove function with rvalue reference
* address comments
2020-03-08 01:11:44 +08:00
5dd35580f7
[Feature] Improve sampling speed; Better pickle/unpickle; other fixes ( #1299 )
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* improve performance of sample_neighbors
* some more improve
* test script
* benchmarks
* multi process
* update more tests
* WIP
* adding two API for state saving
* add create from state
* upd test
* missing file
* wip: pickle/unpickle
* more c apis
* find the problem of empty data array
* add null array; pickling speed is bad
* still bad perf
* still bad perf
* wip
* fix the pickle speed test; now everything looks good
* minor fix
* bugfix
* some lint fix
* address comments
* more fix
* fix lint
* add utest for random.choice
* add utest for dgl.rand_graph
* fix cpp utests
* try fix ci
* fix bug in TF backend
* upd choice docstring
* address comments
* upd
* try fix compile
* add comment
2020-03-02 23:16:05 +08:00
c7f6cf6282
[Bugfix] Consistent order for cross-type stack reducer ( #1267 )
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* WIP
* fix shape of stack reducer
* apply merge order by edge id for stack reducer
2020-02-18 13:54:11 +08:00
f8d4264e5b
[Feature] Neighbor-hood based sampling APIs ( #1251 )
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* WIP: working on random choices
* light slice
* basic CPU impl
* add python binding; fix CreateFromCOO and CreateFromCSR returning unitgraph
* simple test case works
* fix bug in slicing probability array
* fix bug in getting the correct relation graph
* fix bug in creating placeholder graph
* enable omp
* add cpp test
* sample topk
* add in|out_subgraph
* try fix lint; passed all unittests
* fix lint
* fix msvc compile; add sorted flag and constructors
* fix msvc
* coosort
* COOSort; CSRRowWiseSampling; CSRRowWiseTopk
* WIP: remove DType in CSR and COO; Restrict data array to be IdArray
* fix all CSR ops for missing data array
* compiled
* passed tests
* lint
* test sampling out edge
* test different per-relation fanout/k values
* fix bug in random choice
* finished cpptest
* fix compile
* Add induced edges
* add check
* fixed bug in sampling on hypersparse graph; add tests
* add ascending flag
* in|out_subgraph returns subgraph and induced eid
* address comments
* lint
* fix
2020-02-17 21:25:21 +08:00
c7c0fd0e37
[Feature] Accessing node/edge types in UDFs. ( #1243 )
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* typed udf
* docstrings
2020-02-17 16:02:56 +08:00
365d361725
[Bug] Fix #1036 ( #1037 )
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* fix
* unit test
2019-11-29 11:53:29 +08:00
Mufei Li