提交

919 次代码提交

作者 SHA1 备注 提交日期
Mufei Li ed8a7beb42 Update README.txt 2020-07-17 23:29:55 +08:00
Mufei Li b55b7cb611 Update README.txt 2020-07-17 23:28:23 +08:00
Mufei Li 9de930bb25 Update README.md 2020-07-17 23:21:28 +08:00
kyawlinoo bba0b947ae Update index.rst (#1706) 2020-06-26 22:55:16 +08:00
Quan Gan eae4089928 remove edge list creation 2020-06-23 21:27:10 +08:00
Quan Gan 5626058a5a update conda build 0.4.3.post2 2020-04-07 14:23:36 +08:00
Quan Gan 239142b993 update version 2020-04-07 14:22:13 +08:00
Quan Gan 8188a0c8ac Merge branch 'master' into 0.4.x 2020-04-07 14:21:42 +08:00
Quan Gan ff244df0ea post-release 0.4.3.post1 2020-04-06 22:31:51 +08:00
Quan (Andy) Gan 43d9f43a27 backend selection (#1424) 2020-04-06 20:44:29 +08:00
Quan (Andy) Gan 91f7ff8e52 fix #1421 (#1422) 2020-04-06 12:33:43 +08:00
Da Zheng 7c47d8c9b4 [Feature] Simplify shared memory graph index (#1381)
* simplify shared memory graph index.

* fix.

* remove edge_dir in SharedMemGraphStore.

* avoid creating shared-mem graph store with from_csr.

* simplify from_csr.

* add comments.

* fix lint.

* remove the test.

* fix compilation error.

* fix a bug.

* fix a bug.

Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-150.us-west-2.compute.internal>
2020-04-05 15:33:47 -07:00
Mufei Li 1b152bf524 [Doc & Tutorial] Fix dgl.batch and GAT (#1418)
* Update doc and tutorials

* Fix
2020-04-04 01:23:22 +08:00
Mufei Li 0ee95a5e73 Update (#1419) 2020-04-04 01:22:16 +08:00
Quan (Andy) Gan 24dc71fc95 [BUG] Fix #1409 (#1411)
* [BUG] Fix #1409

* fix test
2020-04-03 20:45:56 +08:00
Jinjing Zhou b94d3da84f [Docs] Fix doc build doesn't work for nn.tensorflow and nn.mxnet (#1413) (#1417)
* fix

* lint

* fix
2020-04-03 20:33:54 +08:00
Mufei Li d3560b7155 [DGL-LifeSci] Documentation (#1414)
* Update

* Update

* Update
2020-04-02 21:19:07 +08:00
Jinjing Zhou 7e0893e697 [Docs] Fix doc build doesn't work for nn.tensorflow and nn.mxnet (#1413)
* fix

* lint

* fix
2020-04-02 20:31:07 +08:00
Minjie Wang 31a636a1a4 [README] New stuffs from 0.4.3 (#1412) 2020-04-02 15:33:57 +08:00
Mufei Li 0ee9f56e72 [DGL-LifeSci] Final release preparation for 0.2.1 2020-04-02 15:02:50 +08:00
Minjie Wang 00efec60a0 Update README.md 2020-04-01 16:08:36 +08:00
Mufei Li b76ac11c90 [DGL-LifeSci] Release Preparation (CI, Docker, Conda build) (#1399)
* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* add docs

* Fix style

* Fix lint

* Bug fix

* Fix test

* Update

* Update

* Update

* Update

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2020-04-01 15:45:03 +08:00
Quan Gan e1d90f9b5e update version 0.4.3 2020-03-30 16:21:04 +00:00
Quan Gan 8a061d1ce1 update version 2020-03-30 16:14:46 +00:00
Quan Gan 4a281ff3e6 Merge branch 'master' into 0.4.x 2020-03-30 16:14:14 +00:00
Quan (Andy) Gan e4cc81852d [Windows] fix compilation issues on vs2015 (#1405)
* [Windows] fix compilation issues on vs2015

* fix test
2020-03-30 22:08:26 +08:00
Jinjing Zhou e9440acb06 [TF] TF backend fix and new logic to choose backend (#1393)
* TF backend fix and new logic to choose backend

* fix

* fix

* fix

* fix

* fix backend

* fix

* dlpack alignment

* add flag

* flag

* lint

* lint

* remove unused

* several fixes

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2020-03-30 18:45:17 +08:00
Quan (Andy) Gan 4b4186f87d [Sampler] Change argument type of fanout from list to dict (#1403) 2020-03-30 15:52:46 +08:00
Quan (Andy) Gan 97b08fbba5 [BUG] fix crash in neighbor sampling w/ replacement on 0 degree nodes (#1402) 2020-03-30 14:48:23 +08:00
Quan (Andy) Gan e3a9a6bba8 add an optional include_dst_in_src argument (#1401) 2020-03-30 12:06:12 +08:00
Zihao Ye af61e2fbb4 [Feature] Support nn modules for bipartite graphs. (#1392)
* init gat

* fix

* gin

* 7 nn modules

* rename & lint

* upd

* upd

* fix lint

* upd test

* upd

* lint

* shape check

* upd

* lint

* address comments

* update tensorflow

Co-authored-by: Quan Gan <coin2028@hotmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2020-03-29 16:48:38 +08:00
xiang song(charlie.song) 67cb7a43a0 [Feature] Deprecate multigraph (#1389)
* Deprecate multi-graph

* Handle heterograph and edge_ids

* lint

* Fix

* Remove multigraph in C++ end

* Fix lint

* Add some test and fix something

* Fix

* Fix

* upd

* Fix some test case

* Fix

* Fix

Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2020-03-28 21:31:24 +08:00
Minjie Wang 3efb5d8ecf [NN] Add HeteroGraphConv module for cleaner module definition (#1385)
* Add HeteroGraphConv

* add custom aggregator; some docstring

* debugging

* rm print

* fix some acc bugs

* fix initialization problem in weight basis

* passed tests

* lint

* fix graphconv flag; add error message

* add mxnet heteroconv

* more fix for mx

* lint

* fix torch cuda test

* fix mx test_nn

* add exhaust test for graphconv

* add tf heteroconv

* fix comment
2020-03-27 18:47:06 +08:00
Quan (Andy) Gan bbfff8ce76 [Feature] Casting between DGLGraph and DGLHeteroGraph (#1391)
* [Feature] Casting between DGLGraph and DGLHeteroGraph

* lint

* address comments

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
2020-03-27 13:34:55 +08:00
Jinjing Zhou ebda932d2f [CI] Tensorflow ci (#1397)
* fix

* fix
2020-03-27 03:35:24 +08:00
Jinjing Zhou 1e27e90e4e [MXNet] Patch mxnet unittest (#1395)
* patch

* turn off tf test

* skip test

* fix
2020-03-26 01:05:59 +08:00
Adam J. Stewart 08fcda325b [Doc] Fix link to backends docs (#1376)
Co-authored-by: Tong He <hetong007@gmail.com>
2020-03-25 18:20:09 +08:00
Quan (Andy) Gan b9c65e91ef [BUG] Another fix on remove edges when all edges are removed (#1386)
* [BUG] Another fix on remove edges when all edges are removed

* fix mxnet
2020-03-23 19:04:52 +08:00
Quan (Andy) Gan d27b485912 [BUG] Fix remove_edges crashing with empty edge ID tensors (#1384) 2020-03-22 21:09:44 +08:00
Da Zheng a0721405cf [BUGFIX] don’t import dgl in the package. (#1382)
* fix dgl data.

* remove more.

* fix.

* fix.

Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-150.us-west-2.compute.internal>
2020-03-22 01:29:16 -07:00
Da Zheng 10253a5c07 [BUGFIX] Fix is_multigraph in the construction from scipy coo matrix (#1357)
* fix is_multigraph in from_coo.

* add tests for partition.

* fix.

* Revert "add tests for partition."

This reverts commit cb8c8555da3e0c70a482c2d639adce2943475bfc.

* fix everywhere from_scipy_sparse_matrix is used.
2020-03-22 00:30:27 -07:00
Minjie Wang 856de790e8 Update README
Update README with both latest and stable doc links
2020-03-22 10:44:16 +08:00
Minjie Wang 2cdc4d3c1d [Doc] Patch tutorial (#1380)
* patched 1_first

* done 2_basics

* done 4_batch

* done 1_gcn, 9_gat, 2_capsule

* 4_rgcn.py

* revert

* more fix
2020-03-22 10:21:22 +08:00
Mufei Li 0f40c6e49c [Hetero] Replace card with num_nodes
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2020-03-20 16:56:53 +08:00
xiang song(charlie.song) 1b9bc16b1a [KG]Update README and config (#1375)
* Update README and config

* upd

Co-authored-by: Ubuntu <ubuntu@ip-172-31-60-78.ec2.internal>
2020-03-19 17:06:02 +08:00
Quan (Andy) Gan 4af02022b2 [Bug] Multiple fixes (#1374)
* multiple fixes

* lint

* lint x2
2020-03-19 11:19:44 +08:00
Quan (Andy) Gan 0a51dc5435 [Bug] Fix dsttype in GraphSAGE minibatch model (#1371)
* fix for new ntype API for blocks

* adding two new interfaces
2020-03-18 23:57:03 +08:00
Chao Ma 635dfb4a59 [DGL-KE] Add license to every file header (#1368)
* update metis

* update

* update dataloader

* update dataloader

* new script

* update

* update

* update

* update

* update

* update

* update

* update dataloader

* update

* update

* update

* update

* update

* update

* update

* Add license to every filer header
2020-03-17 17:46:18 +08:00
Chao Ma f8ae6350b1 [DGL-KE] Add METIS preprocessing pipeline (#1365)
* update metis

* update

* update dataloader

* update dataloader

* new script

* update

* update

* update

* update

* update

* update

* update

* update dataloader

* update

* update

* update

* update

* update
2020-03-17 17:15:04 +08:00
Mufei Li 2ce0e21b6b Update (#1366) 2020-03-16 22:00:19 +08:00