#!/usr/bin/env python3 # Copyright (c) 2022 PaddlePaddle Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # Copyright GC-DPR authors. # Copyright (c) Facebook, Inc. and its affiliates. # All rights reserved. # # This source code is licensed under the license found in the # LICENSE file in the root directory of this source tree. """ Command line tool that produces embeddings for a large documents base based on the pretrained ctx & question encoders Supposed to be used in a 'sharded' way to speed up the process. """ import argparse import csv import logging import os import pathlib import pickle from typing import List, Tuple import numpy as np import paddle from biencoder_base_model import BiEncoder from NQdataset import BertTensorizer from paddle import nn from paddle.io import DataLoader, Dataset from tqdm import tqdm from paddlenlp.transformers.bert.modeling import BertModel logger = logging.getLogger() logger.setLevel(logging.INFO) if logger.hasHandlers(): logger.handlers.clear() console = logging.StreamHandler() logger.addHandler(console) class CtxDataset(Dataset): def __init__(self, ctx_rows: List[Tuple[object, str, str]], tensorizer: BertTensorizer, insert_title: bool = True): self.rows = ctx_rows self.tensorizer = tensorizer self.insert_title = insert_title def __len__(self): return len(self.rows) def __getitem__(self, item): ctx = self.rows[item] return self.tensorizer.text_to_tensor(ctx[1], title=ctx[2] if self.insert_title else None) def no_op_collate(xx: List[object]): return xx def gen_ctx_vectors( ctx_rows: List[Tuple[object, str, str]], model: nn.Layer, tensorizer: BertTensorizer, insert_title: bool = True ) -> List[Tuple[object, np.array]]: bsz = args.batch_size total = 0 results = [] dataset = CtxDataset(ctx_rows, tensorizer, insert_title) loader = DataLoader( dataset, shuffle=False, num_workers=2, collate_fn=no_op_collate, drop_last=False, batch_size=bsz ) for batch_id, batch_token_tensors in enumerate(tqdm(loader)): ctx_ids_batch = paddle.stack(batch_token_tensors, axis=0) ctx_seg_batch = paddle.zeros_like(ctx_ids_batch) with paddle.no_grad(): out = model.get_context_pooled_embedding(ctx_ids_batch, ctx_seg_batch) out = out.astype("float32").cpu() batch_start = batch_id * bsz ctx_ids = [r[0] for r in ctx_rows[batch_start : batch_start + bsz]] assert len(ctx_ids) == out.shape[0] total += len(ctx_ids) results.extend([(ctx_ids[i], out[i].reshape([-1]).numpy()) for i in range(out.shape[0])]) return results def main(args): tensorizer = BertTensorizer() question_model = BertModel.from_pretrained(args.que_model_path) context_model = BertModel.from_pretrained(args.con_model_path) model = BiEncoder(question_encoder=question_model, context_encoder=context_model) rows = [] with open(args.ctx_file) as tsvfile: reader = csv.reader(tsvfile, delimiter="\t") # file format: doc_id, doc_text, title rows.extend([(row[0], row[1], row[2]) for row in reader if row[0] != "id"]) shard_size = int(len(rows) / args.num_shards) start_idx = args.shard_id * shard_size end_idx = start_idx + shard_size logger.info("Producing encodings for passages range: %d to %d (out of total %d)", start_idx, end_idx, len(rows)) rows = rows[start_idx:end_idx] data = gen_ctx_vectors(rows, model, tensorizer, True) file = args.out_file + "_" + str(args.shard_id) + ".pkl" pathlib.Path(os.path.dirname(file)).mkdir(parents=True, exist_ok=True) logger.info("Writing results to %s" % file) with open(file, mode="wb") as f: pickle.dump(data, f) logger.info("Total passages processed %d. Written to %s", len(data), file) if __name__ == "__main__": parser = argparse.ArgumentParser() parser.add_argument("--ctx_file", type=str, default=None, help="Path to passages set .tsv file") parser.add_argument( "--out_file", required=True, type=str, default=None, help="output file path to write results to" ) parser.add_argument("--shard_id", type=int, default=0, help="Number(0-based) of data shard to process") parser.add_argument("--num_shards", type=int, default=1, help="Total amount of data shards") parser.add_argument("--batch_size", type=int, default=32, help="Batch size for the passage encoder forward pass") parser.add_argument("--que_model_path", type=str) parser.add_argument("--con_model_path", type=str) args = parser.parse_args() main(args)