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Python

import dgl
import pytest
import torch
from dgl import graphbolt as gb
from torch.testing import assert_close
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSet_node_ids(batch_size, shuffle, drop_last):
# Node IDs.
num_ids = 103
item_set = gb.ItemSet(torch.arange(0, num_ids))
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
minibatch_ids = []
for i, minibatch in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= num_ids
if not is_last or num_ids % batch_size == 0:
assert len(minibatch) == batch_size
else:
if not drop_last:
assert len(minibatch) == num_ids % batch_size
else:
assert False
minibatch_ids.append(minibatch)
minibatch_ids = torch.cat(minibatch_ids)
assert torch.all(minibatch_ids[:-1] <= minibatch_ids[1:]) is not shuffle
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSet_graphs(batch_size, shuffle, drop_last):
# Graphs.
num_graphs = 103
num_nodes = 10
num_edges = 20
graphs = [
dgl.rand_graph(num_nodes * (i + 1), num_edges * (i + 1))
for i in range(num_graphs)
]
item_set = gb.ItemSet(graphs)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
minibatch_num_nodes = []
minibatch_num_edges = []
for i, minibatch in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= num_graphs
if not is_last or num_graphs % batch_size == 0:
assert minibatch.batch_size == batch_size
else:
if not drop_last:
assert minibatch.batch_size == num_graphs % batch_size
else:
assert False
minibatch_num_nodes.append(minibatch.batch_num_nodes())
minibatch_num_edges.append(minibatch.batch_num_edges())
minibatch_num_nodes = torch.cat(minibatch_num_nodes)
minibatch_num_edges = torch.cat(minibatch_num_edges)
assert (
torch.all(minibatch_num_nodes[:-1] <= minibatch_num_nodes[1:])
is not shuffle
)
assert (
torch.all(minibatch_num_edges[:-1] <= minibatch_num_edges[1:])
is not shuffle
)
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSet_node_pairs(batch_size, shuffle, drop_last):
# Node pairs.
num_ids = 103
node_pairs = (torch.arange(0, num_ids), torch.arange(num_ids, num_ids * 2))
item_set = gb.ItemSet(node_pairs)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
src_ids = []
dst_ids = []
for i, (src, dst) in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= num_ids
if not is_last or num_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = num_ids % batch_size
else:
assert False
assert len(src) == expected_batch_size
assert len(dst) == expected_batch_size
# Verify src and dst IDs match.
assert torch.equal(src + num_ids, dst)
# Archive batch.
src_ids.append(src)
dst_ids.append(dst)
src_ids = torch.cat(src_ids)
dst_ids = torch.cat(dst_ids)
assert torch.all(src_ids[:-1] <= src_ids[1:]) is not shuffle
assert torch.all(dst_ids[:-1] <= dst_ids[1:]) is not shuffle
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSet_node_pairs_labels(batch_size, shuffle, drop_last):
# Node pairs and labels
num_ids = 103
node_pairs = (torch.arange(0, num_ids), torch.arange(num_ids, num_ids * 2))
labels = torch.arange(0, num_ids)
item_set = gb.ItemSet((node_pairs[0], node_pairs[1], labels))
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
src_ids = []
dst_ids = []
labels = []
for i, (src, dst, label) in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= num_ids
if not is_last or num_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = num_ids % batch_size
else:
assert False
assert len(src) == expected_batch_size
assert len(dst) == expected_batch_size
assert len(label) == expected_batch_size
# Verify src/dst IDs and labels match.
assert torch.equal(src + num_ids, dst)
assert torch.equal(src, label)
# Archive batch.
src_ids.append(src)
dst_ids.append(dst)
labels.append(label)
src_ids = torch.cat(src_ids)
dst_ids = torch.cat(dst_ids)
labels = torch.cat(labels)
assert torch.all(src_ids[:-1] <= src_ids[1:]) is not shuffle
assert torch.all(dst_ids[:-1] <= dst_ids[1:]) is not shuffle
assert torch.all(labels[:-1] <= labels[1:]) is not shuffle
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSet_head_tail_neg_tails(batch_size, shuffle, drop_last):
# Head, tail and negative tails.
num_ids = 103
num_negs = 2
heads = torch.arange(0, num_ids)
tails = torch.arange(num_ids, num_ids * 2)
neg_tails = torch.stack((heads + 1, heads + 2), dim=-1)
item_set = gb.ItemSet((heads, tails, neg_tails))
for i, (head, tail, negs) in enumerate(item_set):
assert heads[i] == head
assert tails[i] == tail
assert torch.equal(neg_tails[i], negs)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
head_ids = []
tail_ids = []
negs_ids = []
for i, (head, tail, negs) in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= num_ids
if not is_last or num_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = num_ids % batch_size
else:
assert False
assert len(head) == expected_batch_size
assert len(tail) == expected_batch_size
assert negs.dim() == 2
assert negs.shape[0] == expected_batch_size
assert negs.shape[1] == num_negs
# Verify head/tail and negatie tails match.
assert torch.equal(head + num_ids, tail)
assert torch.equal(head + 1, negs[:, 0])
assert torch.equal(head + 2, negs[:, 1])
# Archive batch.
head_ids.append(head)
tail_ids.append(tail)
negs_ids.append(negs)
head_ids = torch.cat(head_ids)
tail_ids = torch.cat(tail_ids)
negs_ids = torch.cat(negs_ids)
assert torch.all(head_ids[:-1] <= head_ids[1:]) is not shuffle
assert torch.all(tail_ids[:-1] <= tail_ids[1:]) is not shuffle
assert torch.all(negs_ids[:-1, 0] <= negs_ids[1:, 0]) is not shuffle
assert torch.all(negs_ids[:-1, 1] <= negs_ids[1:, 1]) is not shuffle
def test_append_with_other_datapipes():
num_ids = 100
batch_size = 4
item_set = gb.ItemSet(torch.arange(0, num_ids))
data_pipe = gb.MinibatchSampler(item_set, batch_size)
# torchdata.datapipes.iter.Enumerator
data_pipe = data_pipe.enumerate()
for i, (idx, data) in enumerate(data_pipe):
assert i == idx
assert len(data) == batch_size
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSetDict_node_ids(batch_size, shuffle, drop_last):
# Node IDs.
num_ids = 205
ids = {
"user": gb.ItemSet(torch.arange(0, 99)),
"item": gb.ItemSet(torch.arange(99, num_ids)),
}
chained_ids = []
for key, value in ids.items():
chained_ids += [(key, v) for v in value]
item_set = gb.ItemSetDict(ids)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
minibatch_ids = []
for i, batch in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= num_ids
if not is_last or num_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = num_ids % batch_size
else:
assert False
assert isinstance(batch, dict)
ids = []
for _, v in batch.items():
ids.append(v)
ids = torch.cat(ids)
assert len(ids) == expected_batch_size
minibatch_ids.append(ids)
minibatch_ids = torch.cat(minibatch_ids)
assert torch.all(minibatch_ids[:-1] <= minibatch_ids[1:]) is not shuffle
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSetDict_node_pairs(batch_size, shuffle, drop_last):
# Node pairs.
num_ids = 103
total_ids = 2 * num_ids
node_pairs_0 = (
torch.arange(0, num_ids),
torch.arange(num_ids, num_ids * 2),
)
node_pairs_1 = (
torch.arange(num_ids * 2, num_ids * 3),
torch.arange(num_ids * 3, num_ids * 4),
)
node_pairs_dict = {
("user", "like", "item"): gb.ItemSet(node_pairs_0),
("user", "follow", "user"): gb.ItemSet(node_pairs_1),
}
item_set = gb.ItemSetDict(node_pairs_dict)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
src_ids = []
dst_ids = []
for i, batch in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= total_ids
if not is_last or total_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = total_ids % batch_size
else:
assert False
src = []
dst = []
for _, (v_src, v_dst) in batch.items():
src.append(v_src)
dst.append(v_dst)
src = torch.cat(src)
dst = torch.cat(dst)
assert len(src) == expected_batch_size
assert len(dst) == expected_batch_size
src_ids.append(src)
dst_ids.append(dst)
assert torch.equal(src + num_ids, dst)
src_ids = torch.cat(src_ids)
dst_ids = torch.cat(dst_ids)
assert torch.all(src_ids[:-1] <= src_ids[1:]) is not shuffle
assert torch.all(dst_ids[:-1] <= dst_ids[1:]) is not shuffle
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSetDict_node_pairs_labels(batch_size, shuffle, drop_last):
# Node pairs and labels
num_ids = 103
total_ids = 2 * num_ids
node_pairs_0 = (
torch.arange(0, num_ids),
torch.arange(num_ids, num_ids * 2),
)
node_pairs_1 = (
torch.arange(num_ids * 2, num_ids * 3),
torch.arange(num_ids * 3, num_ids * 4),
)
labels = torch.arange(0, num_ids)
node_pairs_dict = {
("user", "like", "item"): gb.ItemSet(
(node_pairs_0[0], node_pairs_0[1], labels)
),
("user", "follow", "user"): gb.ItemSet(
(node_pairs_1[0], node_pairs_1[1], labels + num_ids * 2)
),
}
item_set = gb.ItemSetDict(node_pairs_dict)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
src_ids = []
dst_ids = []
labels = []
for i, batch in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= total_ids
if not is_last or total_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = total_ids % batch_size
else:
assert False
src = []
dst = []
label = []
for _, (v_src, v_dst, v_label) in batch.items():
src.append(v_src)
dst.append(v_dst)
label.append(v_label)
src = torch.cat(src)
dst = torch.cat(dst)
label = torch.cat(label)
assert len(src) == expected_batch_size
assert len(dst) == expected_batch_size
assert len(label) == expected_batch_size
src_ids.append(src)
dst_ids.append(dst)
labels.append(label)
assert torch.equal(src + num_ids, dst)
assert torch.equal(src, label)
src_ids = torch.cat(src_ids)
dst_ids = torch.cat(dst_ids)
labels = torch.cat(labels)
assert torch.all(src_ids[:-1] <= src_ids[1:]) is not shuffle
assert torch.all(dst_ids[:-1] <= dst_ids[1:]) is not shuffle
assert torch.all(labels[:-1] <= labels[1:]) is not shuffle
@pytest.mark.parametrize("batch_size", [1, 4])
@pytest.mark.parametrize("shuffle", [True, False])
@pytest.mark.parametrize("drop_last", [True, False])
def test_ItemSetDict_head_tail_neg_tails(batch_size, shuffle, drop_last):
# Head, tail and negative tails.
num_ids = 103
total_ids = 2 * num_ids
num_negs = 2
heads = torch.arange(0, num_ids)
tails = torch.arange(num_ids, num_ids * 2)
neg_tails = torch.stack((heads + 1, heads + 2), dim=-1)
data_dict = {
("user", "like", "item"): gb.ItemSet((heads, tails, neg_tails)),
("user", "follow", "user"): gb.ItemSet((heads, tails, neg_tails)),
}
item_set = gb.ItemSetDict(data_dict)
minibatch_sampler = gb.MinibatchSampler(
item_set, batch_size=batch_size, shuffle=shuffle, drop_last=drop_last
)
head_ids = []
tail_ids = []
negs_ids = []
for i, batch in enumerate(minibatch_sampler):
is_last = (i + 1) * batch_size >= total_ids
if not is_last or total_ids % batch_size == 0:
expected_batch_size = batch_size
else:
if not drop_last:
expected_batch_size = total_ids % batch_size
else:
assert False
head = []
tail = []
negs = []
for _, (v_head, v_tail, v_negs) in batch.items():
head.append(v_head)
tail.append(v_tail)
negs.append(v_negs)
head = torch.cat(head)
tail = torch.cat(tail)
negs = torch.cat(negs)
assert len(head) == expected_batch_size
assert len(tail) == expected_batch_size
assert len(negs) == expected_batch_size
head_ids.append(head)
tail_ids.append(tail)
negs_ids.append(negs)
assert negs.dim() == 2
assert negs.shape[0] == expected_batch_size
assert negs.shape[1] == num_negs
assert torch.equal(head + num_ids, tail)
assert torch.equal(head + 1, negs[:, 0])
assert torch.equal(head + 2, negs[:, 1])
head_ids = torch.cat(head_ids)
tail_ids = torch.cat(tail_ids)
negs_ids = torch.cat(negs_ids)
assert torch.all(head_ids[:-1] <= head_ids[1:]) is not shuffle
assert torch.all(tail_ids[:-1] <= tail_ids[1:]) is not shuffle
assert torch.all(negs_ids[:-1] <= negs_ids[1:]) is not shuffle