dmlc--dgl
319 行
9.9 KiB
Python
319 行
9.9 KiB
Python
import re
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import unittest
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from collections.abc import Iterable, Mapping
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import backend as F
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import dgl.graphbolt as gb
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import pytest
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import torch
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from . import gb_test_utils
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@unittest.skipIf(F._default_context_str == "cpu", "CopyTo needs GPU to test")
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def test_CopyTo():
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item_sampler = gb.ItemSampler(
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gb.ItemSet(torch.arange(20), names="seed_nodes"), 4
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)
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# Invoke CopyTo via class constructor.
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dp = gb.CopyTo(item_sampler, "cuda")
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for data in dp:
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assert data.seed_nodes.device.type == "cuda"
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# Invoke CopyTo via functional form.
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dp = item_sampler.copy_to("cuda")
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for data in dp:
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assert data.seed_nodes.device.type == "cuda"
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@pytest.mark.parametrize(
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"task",
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[
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"node_classification",
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"node_inference",
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"link_prediction",
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"edge_classification",
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"extra_attrs",
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"other",
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],
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)
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@unittest.skipIf(F._default_context_str == "cpu", "CopyTo needs GPU to test")
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def test_CopyToWithMiniBatches(task):
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N = 16
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B = 2
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if task == "node_classification" or task == "extra_attrs":
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itemset = gb.ItemSet(
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(torch.arange(N), torch.arange(N)), names=("seed_nodes", "labels")
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)
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elif task == "node_inference":
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itemset = gb.ItemSet(torch.arange(N), names="seed_nodes")
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elif task == "link_prediction":
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itemset = gb.ItemSet(
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(
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torch.arange(2 * N).reshape(-1, 2),
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torch.arange(3 * N).reshape(-1, 3),
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),
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names=("node_pairs", "negative_dsts"),
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)
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elif task == "edge_classification":
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itemset = gb.ItemSet(
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(torch.arange(2 * N).reshape(-1, 2), torch.arange(N)),
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names=("node_pairs", "labels"),
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)
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else:
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itemset = gb.ItemSet(
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(torch.arange(2 * N).reshape(-1, 2), torch.arange(N)),
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names=("node_pairs", "seed_nodes"),
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)
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graph = gb_test_utils.rand_csc_graph(100, 0.15, bidirection_edge=True)
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features = {}
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keys = [("node", None, "a"), ("node", None, "b")]
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features[keys[0]] = gb.TorchBasedFeature(torch.randn(200, 4))
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features[keys[1]] = gb.TorchBasedFeature(torch.randn(200, 4))
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feature_store = gb.BasicFeatureStore(features)
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datapipe = gb.ItemSampler(itemset, batch_size=B)
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datapipe = gb.NeighborSampler(
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datapipe,
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graph,
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fanouts=[torch.LongTensor([2]) for _ in range(2)],
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)
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if task != "node_inference":
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datapipe = gb.FeatureFetcher(
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datapipe,
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feature_store,
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["a"],
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)
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if task == "node_classification":
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copied_attrs = [
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"node_features",
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"edge_features",
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"sampled_subgraphs",
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"labels",
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"blocks",
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]
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elif task == "node_inference":
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copied_attrs = [
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"seed_nodes",
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"sampled_subgraphs",
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"blocks",
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"labels",
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]
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elif task == "link_prediction":
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copied_attrs = [
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"compacted_node_pairs",
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"node_features",
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"edge_features",
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"sampled_subgraphs",
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"compacted_negative_srcs",
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"compacted_negative_dsts",
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"blocks",
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"positive_node_pairs",
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"negative_node_pairs",
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"node_pairs_with_labels",
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]
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elif task == "edge_classification":
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copied_attrs = [
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"compacted_node_pairs",
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"node_features",
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"edge_features",
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"sampled_subgraphs",
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"labels",
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"blocks",
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"positive_node_pairs",
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"negative_node_pairs",
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"node_pairs_with_labels",
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]
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elif task == "extra_attrs":
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copied_attrs = [
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"node_features",
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"edge_features",
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"sampled_subgraphs",
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"labels",
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"blocks",
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"seed_nodes",
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]
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def test_data_device(datapipe):
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for data in datapipe:
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for attr in dir(data):
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var = getattr(data, attr)
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if isinstance(var, Mapping):
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var = var[next(iter(var))]
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elif isinstance(var, Iterable):
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var = next(iter(var))
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if (
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not callable(var)
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and not attr.startswith("__")
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and hasattr(var, "device")
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and var is not None
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):
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if task == "other":
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assert var.device.type == "cuda"
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else:
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if attr in copied_attrs:
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assert var.device.type == "cuda"
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else:
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assert var.device.type == "cpu"
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if task == "extra_attrs":
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extra_attrs = ["seed_nodes"]
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else:
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extra_attrs = None
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# Invoke CopyTo via class constructor.
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test_data_device(gb.CopyTo(datapipe, "cuda", extra_attrs))
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# Invoke CopyTo via functional form.
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test_data_device(datapipe.copy_to("cuda", extra_attrs))
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def test_etype_tuple_to_str():
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"""Convert etype from tuple to string."""
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# Test for expected input.
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c_etype = ("user", "like", "item")
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c_etype_str = gb.etype_tuple_to_str(c_etype)
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assert c_etype_str == "user:like:item"
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# Test for unexpected input: not a tuple.
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c_etype = "user:like:item"
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with pytest.raises(
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AssertionError,
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match=re.escape(
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"Passed-in canonical etype should be in format of (str, str, str). "
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"But got user:like:item."
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),
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):
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_ = gb.etype_tuple_to_str(c_etype)
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# Test for unexpected input: tuple with wrong length.
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c_etype = ("user", "like")
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with pytest.raises(
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AssertionError,
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match=re.escape(
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"Passed-in canonical etype should be in format of (str, str, str). "
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"But got ('user', 'like')."
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),
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):
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_ = gb.etype_tuple_to_str(c_etype)
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def test_etype_str_to_tuple():
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"""Convert etype from string to tuple."""
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# Test for expected input.
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c_etype_str = "user:like:item"
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c_etype = gb.etype_str_to_tuple(c_etype_str)
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assert c_etype == ("user", "like", "item")
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# Test for unexpected input: string with wrong format.
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c_etype_str = "user:like"
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with pytest.raises(
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AssertionError,
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match=re.escape(
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"Passed-in canonical etype should be in format of 'str:str:str'. "
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"But got user:like."
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),
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):
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_ = gb.etype_str_to_tuple(c_etype_str)
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def test_isin():
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elements = torch.tensor([2, 3, 5, 5, 20, 13, 11], device=F.ctx())
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test_elements = torch.tensor([2, 5], device=F.ctx())
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res = gb.isin(elements, test_elements)
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expected = torch.tensor(
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[True, False, True, True, False, False, False], device=F.ctx()
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)
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assert torch.equal(res, expected)
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def test_isin_big_data():
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elements = torch.randint(0, 10000, (10000000,), device=F.ctx())
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test_elements = torch.randint(0, 10000, (500000,), device=F.ctx())
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res = gb.isin(elements, test_elements)
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expected = torch.isin(elements, test_elements)
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assert torch.equal(res, expected)
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def test_isin_non_1D_dim():
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elements = torch.tensor([[2, 3], [5, 5], [20, 13]], device=F.ctx())
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test_elements = torch.tensor([2, 5], device=F.ctx())
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with pytest.raises(Exception):
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gb.isin(elements, test_elements)
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elements = torch.tensor([2, 3, 5, 5, 20, 13], device=F.ctx())
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test_elements = torch.tensor([[2, 5]], device=F.ctx())
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with pytest.raises(Exception):
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gb.isin(elements, test_elements)
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@pytest.mark.parametrize(
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"dtype",
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[
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torch.bool,
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torch.uint8,
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torch.int8,
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torch.int16,
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torch.int32,
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torch.int64,
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torch.float16,
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torch.bfloat16,
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torch.float32,
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torch.float64,
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],
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)
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@pytest.mark.parametrize("idtype", [torch.int32, torch.int64])
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@pytest.mark.parametrize("pinned", [False, True])
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def test_index_select(dtype, idtype, pinned):
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if F._default_context_str != "gpu" and pinned:
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pytest.skip("Pinned tests are available only on GPU.")
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tensor = torch.tensor([[2, 3], [5, 5], [20, 13]], dtype=dtype)
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tensor = tensor.pin_memory() if pinned else tensor.to(F.ctx())
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index = torch.tensor([0, 2], dtype=idtype, device=F.ctx())
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gb_result = gb.index_select(tensor, index)
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torch_result = tensor.to(F.ctx())[index.long()]
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assert torch.equal(torch_result, gb_result)
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def torch_expand_indptr(indptr, dtype, nodes=None):
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if nodes is None:
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nodes = torch.arange(len(indptr) - 1, dtype=dtype, device=indptr.device)
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return nodes.to(dtype).repeat_interleave(indptr.diff())
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@pytest.mark.parametrize("nodes", [None, True])
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@pytest.mark.parametrize("dtype", [torch.int32, torch.int64])
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def test_expand_indptr(nodes, dtype):
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if nodes:
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nodes = torch.tensor([1, 7, 3, 4, 5, 8], dtype=dtype, device=F.ctx())
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indptr = torch.tensor([0, 2, 2, 7, 10, 12, 20], device=F.ctx())
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torch_result = torch_expand_indptr(indptr, dtype, nodes)
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gb_result = gb.expand_indptr(indptr, dtype, nodes)
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assert torch.equal(torch_result, gb_result)
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gb_result = gb.expand_indptr(indptr, dtype, nodes, indptr[-1].item())
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assert torch.equal(torch_result, gb_result)
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def test_csc_format_base_representation():
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csc_format_base = gb.CSCFormatBase(
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indptr=torch.tensor([0, 2, 4]),
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indices=torch.tensor([4, 5, 6, 7]),
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)
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expected_result = str(
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"""CSCFormatBase(indptr=tensor([0, 2, 4]),
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indices=tensor([4, 5, 6, 7]),
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)"""
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)
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assert str(csc_format_base) == expected_result, print(csc_format_base)
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def test_csc_format_base_incorrect_indptr():
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indptr = torch.tensor([0, 2, 4, 6, 7, 11])
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indices = torch.tensor([2, 3, 1, 4, 5, 2, 5, 1, 4, 4])
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with pytest.raises(AssertionError):
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# The value of last element in indptr is not corresponding to indices.
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csc_formats = gb.CSCFormatBase(indptr=indptr, indices=indices)
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