dmlc--dgl
3fef5d27d3
* publish pct * add train_cls * add readme * update opt for point transformer * update the example index * update for comments Co-authored-by: Tong He <hetong007@gmail.com>
166 行
4.9 KiB
Python
166 行
4.9 KiB
Python
import torch
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import torch.nn as nn
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import torch.nn.functional as F
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import dgl
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from dgl.geometry import farthest_point_sampler
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'''
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Part of the code are adapted from
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https://github.com/yanx27/Pointnet_Pointnet2_pytorch
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'''
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def square_distance(src, dst):
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'''
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Adapted from https://github.com/yanx27/Pointnet_Pointnet2_pytorch
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'''
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B, N, _ = src.shape
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_, M, _ = dst.shape
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dist = -2 * torch.matmul(src, dst.permute(0, 2, 1))
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dist += torch.sum(src ** 2, -1).view(B, N, 1)
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dist += torch.sum(dst ** 2, -1).view(B, 1, M)
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return dist
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def index_points(points, idx):
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'''
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Adapted from https://github.com/yanx27/Pointnet_Pointnet2_pytorch
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'''
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device = points.device
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B = points.shape[0]
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view_shape = list(idx.shape)
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view_shape[1:] = [1] * (len(view_shape) - 1)
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repeat_shape = list(idx.shape)
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repeat_shape[0] = 1
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batch_indices = torch.arange(B, dtype=torch.long).to(
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device).view(view_shape).repeat(repeat_shape)
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new_points = points[batch_indices, idx, :]
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return new_points
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class KNearNeighbors(nn.Module):
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'''
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Find the k nearest neighbors
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'''
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def __init__(self, n_neighbor):
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super(KNearNeighbors, self).__init__()
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self.n_neighbor = n_neighbor
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def forward(self, pos, centroids):
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'''
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Adapted from https://github.com/yanx27/Pointnet_Pointnet2_pytorch
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'''
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center_pos = index_points(pos, centroids)
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sqrdists = square_distance(center_pos, pos)
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group_idx = sqrdists.argsort(dim=-1)[:, :, :self.n_neighbor]
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return group_idx
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class KNNGraphBuilder(nn.Module):
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'''
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Build NN graph
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'''
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def __init__(self, n_neighbor):
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super(KNNGraphBuilder, self).__init__()
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self.n_neighbor = n_neighbor
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self.knn = KNearNeighbors(n_neighbor)
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def forward(self, pos, centroids, feat=None):
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dev = pos.device
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group_idx = self.knn(pos, centroids)
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B, N, _ = pos.shape
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glist = []
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for i in range(B):
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center = torch.zeros((N)).to(dev)
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center[centroids[i]] = 1
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src = group_idx[i].contiguous().view(-1)
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dst = centroids[i].view(-1, 1).repeat(1, min(self.n_neighbor,
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src.shape[0] // centroids.shape[1])).view(-1)
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unified = torch.cat([src, dst])
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uniq, inv_idx = torch.unique(unified, return_inverse=True)
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src_idx = inv_idx[:src.shape[0]]
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dst_idx = inv_idx[src.shape[0]:]
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g = dgl.graph((src_idx, dst_idx))
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g.ndata['pos'] = pos[i][uniq]
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g.ndata['center'] = center[uniq]
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if feat is not None:
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g.ndata['feat'] = feat[i][uniq]
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glist.append(g)
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bg = dgl.batch(glist)
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return bg
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class KNNMessage(nn.Module):
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'''
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Compute the input feature from neighbors
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'''
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def __init__(self, n_neighbor):
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super(KNNMessage, self).__init__()
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self.n_neighbor = n_neighbor
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def forward(self, edges):
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norm = edges.src['feat'] - edges.dst['feat']
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if 'feat' in edges.src:
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res = torch.cat([norm, edges.src['feat']], 1)
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else:
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res = norm
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return {'agg_feat': res}
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class KNNConv(nn.Module):
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'''
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Feature aggregation
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'''
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def __init__(self, sizes):
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super(KNNConv, self).__init__()
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self.conv = nn.ModuleList()
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self.bn = nn.ModuleList()
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for i in range(1, len(sizes)):
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self.conv.append(nn.Conv2d(sizes[i-1], sizes[i], 1))
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self.bn.append(nn.BatchNorm2d(sizes[i]))
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def forward(self, nodes):
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shape = nodes.mailbox['agg_feat'].shape
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h = nodes.mailbox['agg_feat'].view(
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shape[0], -1, shape[1], shape[2]).permute(0, 3, 2, 1)
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for conv, bn in zip(self.conv, self.bn):
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h = conv(h)
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h = bn(h)
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h = F.relu(h)
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h = torch.max(h, 2)[0]
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feat_dim = h.shape[1]
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h = h.permute(0, 2, 1).reshape(-1, feat_dim)
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return {'new_feat': h}
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class TransitionDown(nn.Module):
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"""
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The Transition Down Module
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"""
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def __init__(self, in_channels, out_channels, n_neighbor=64):
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super(TransitionDown, self).__init__()
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self.frnn_graph = KNNGraphBuilder(n_neighbor)
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self.message = KNNMessage(n_neighbor)
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self.conv = KNNConv([in_channels, out_channels, out_channels])
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def forward(self, pos, feat, n_point):
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batch_size = pos.shape[0]
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centroids = farthest_point_sampler(pos, n_point)
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g = self.frnn_graph(pos, centroids, feat)
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g.update_all(self.message, self.conv)
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mask = g.ndata['center'] == 1
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pos_dim = g.ndata['pos'].shape[-1]
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feat_dim = g.ndata['new_feat'].shape[-1]
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pos_res = g.ndata['pos'][mask].view(batch_size, -1, pos_dim)
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feat_res = g.ndata['new_feat'][mask].view(
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batch_size, -1, feat_dim)
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return pos_res, feat_res
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