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xiang song(charlie.song) 2f7ca41459 [Bug fix] Use shared memory for grad sync when NCCL is not avaliable as PyTorch distributed backend. (#3034)
* Use shared memory for grad sync when NCCL is not avaliable as PyTorch distributed backend.

Fix small bugs and update unitests

* Fix bug

* update test

* update test

* Fix unitest

* Fix unitest

* Fix test

* Fix

* simple update

Co-authored-by: Ubuntu <ubuntu@ip-172-31-24-212.ec2.internal>
2021-06-24 12:06:54 +08:00

408 行
14 KiB
Python

import time
import torch.multiprocessing as mp
import unittest, os
import pytest
import torch as th
import backend as F
from dgl.nn import NodeEmbedding
from dgl.optim import SparseAdam, SparseAdagrad
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
def test_sparse_adam():
num_embs = 10
emb_dim = 4
device=F.ctx()
dgl_emb = NodeEmbedding(num_embs, emb_dim, 'test')
torch_emb = th.nn.Embedding(num_embs, emb_dim, sparse=True)
th.manual_seed(0)
th.nn.init.uniform_(torch_emb.weight, 0, 1.0)
th.manual_seed(0)
th.nn.init.uniform_(dgl_emb.weight, 0, 1.0)
dgl_adam = SparseAdam(params=[dgl_emb], lr=0.01)
torch_adam = th.optim.SparseAdam(list(torch_emb.parameters()), lr=0.01)
# first step
idx = th.randint(0, num_embs, size=(4,))
dgl_value = dgl_emb(idx, device).to(th.device('cpu'))
torch_value = torch_emb(idx)
labels = th.ones((4,)).long()
dgl_adam.zero_grad()
torch_adam.zero_grad()
dgl_loss = th.nn.functional.cross_entropy(dgl_value, labels)
torch_loss = th.nn.functional.cross_entropy(torch_value, labels)
dgl_loss.backward()
torch_loss.backward()
dgl_adam.step()
torch_adam.step()
assert F.allclose(dgl_emb.weight, torch_emb.weight)
# Can not test second step
# Pytorch sparseAdam maintains a global step
# DGL sparseAdam use a per embedding step
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
def test_sparse_adam_zero_step():
num_embs = 10
emb_dim = 4
device=F.ctx()
dgl_emb = NodeEmbedding(num_embs, emb_dim, 'test')
torch_emb = th.nn.Embedding(num_embs, emb_dim, sparse=True)
dgl_emb_zero = NodeEmbedding(num_embs, emb_dim, 'test2')
torch_emb_zero = th.nn.Embedding(num_embs, emb_dim, sparse=True)
th.manual_seed(0)
th.nn.init.uniform_(torch_emb.weight, 0, 1.0)
th.nn.init.uniform_(torch_emb_zero.weight, 0, 1.0)
th.manual_seed(0)
th.nn.init.uniform_(dgl_emb.weight, 0, 1.0)
th.nn.init.uniform_(dgl_emb_zero.weight, 0, 1.0)
dgl_adam = SparseAdam(params=[dgl_emb, dgl_emb_zero], lr=0.01)
torch_adam = th.optim.SparseAdam(
list(torch_emb.parameters()) + list(torch_emb_zero.parameters()), lr=0.01)
# first step
idx = th.randint(0, num_embs, size=(4,))
dgl_value = dgl_emb(idx, device).to(th.device('cpu'))
torch_value = torch_emb(idx)
labels = th.ones((4,)).long()
dgl_adam.zero_grad()
torch_adam.zero_grad()
dgl_loss = th.nn.functional.cross_entropy(dgl_value, labels)
torch_loss = th.nn.functional.cross_entropy(torch_value, labels)
dgl_loss.backward()
torch_loss.backward()
dgl_adam.step()
torch_adam.step()
assert F.allclose(dgl_emb.weight, torch_emb.weight)
def initializer(emb):
th.manual_seed(0)
emb.uniform_(-1.0, 1.0)
return emb
def start_sparse_adam_worker(rank, device, world_size, weight, tensor_dev='cpu', has_zero_grad=False,
backend='gloo', num_embs=128, emb_dim=10):
print('start sparse worker for adam {}'.format(rank))
dist_init_method = 'tcp://{master_ip}:{master_port}'.format(
master_ip='127.0.0.1', master_port='12345')
if device.type == 'cuda':
th.cuda.set_device(device)
th.distributed.init_process_group(backend=backend,
init_method=dist_init_method,
world_size=world_size,
rank=rank)
init_weight = th.empty((num_embs, emb_dim))
th.manual_seed(0)
th.nn.init.uniform_(init_weight, -1.0, 1.0)
dgl_emb = NodeEmbedding(num_embs, emb_dim, 'test', init_func=initializer, device=tensor_dev)
dgl_emb.all_set_embedding(init_weight)
if has_zero_grad:
dgl_emb_zero = NodeEmbedding(num_embs, emb_dim, 'zero', init_func=initializer, device=tensor_dev)
dgl_adam = SparseAdam(params=[dgl_emb, dgl_emb_zero], lr=0.01)
else:
dgl_adam = SparseAdam(params=[dgl_emb], lr=0.01)
start = (num_embs // world_size) * rank
end = (num_embs // world_size) * (rank + 1)
th.manual_seed(rank)
idx = th.randint(start, end, size=(4,)).to(tensor_dev)
dgl_value = dgl_emb(idx, device)
labels = th.ones((4,)).long().to(device)
dgl_loss = th.nn.functional.cross_entropy(dgl_value, labels)
dgl_adam.zero_grad()
dgl_loss.backward()
dgl_adam.step()
th.distributed.barrier()
dgl_weight = dgl_emb.all_get_embedding().detach()
after_step = dgl_emb(idx, device).cpu()
if rank == 0:
dgl_value = dgl_value.detach().cpu()
assert F.allclose(dgl_value, after_step) is False
weight[:] = dgl_weight[:]
th.distributed.barrier()
def start_torch_adam_worker(rank, world_size, weight, has_zero_grad=False,
num_embs=128, emb_dim=10):
print('start sparse worker for adam {}'.format(rank))
dist_init_method = 'tcp://{master_ip}:{master_port}'.format(
master_ip='127.0.0.1', master_port='12345')
backend='gloo'
th.distributed.init_process_group(backend=backend,
init_method=dist_init_method,
world_size=world_size,
rank=rank)
torch_emb = th.nn.Embedding(num_embs, emb_dim, sparse=True)
th.manual_seed(0)
th.nn.init.uniform_(torch_emb.weight, -1.0, 1.0)
torch_emb = th.nn.parallel.DistributedDataParallel(torch_emb)
if has_zero_grad:
torch_emb_zero = th.nn.Embedding(num_embs, emb_dim, sparse=True)
torch_emb_zero = torch_emb_zero.to(tensor_dev)
th.manual_seed(0)
th.nn.init.uniform_(torch_emb_zero.weight, -1.0, 1.0)
torch_emb_zero = th.nn.parallel.DistributedDataParallel(torch_emb_zero)
torch_adam = th.optim.SparseAdam(
list(torch_emb.module.parameters()) + list(torch_emb_zero.module.parameters()),
lr=0.01)
else:
torch_adam = th.optim.SparseAdam(list(torch_emb.module.parameters()), lr=0.01)
start = (num_embs // world_size) * rank
end = (num_embs // world_size) * (rank + 1)
th.manual_seed(rank)
idx = th.randint(start, end, size=(4,))
labels = th.ones((4,)).long()
torch_value = torch_emb(idx)
torch_loss = th.nn.functional.cross_entropy(torch_value, labels)
torch_adam.zero_grad()
torch_loss.backward()
torch_adam.step()
th.distributed.barrier()
if rank == 0:
weight[:] = torch_emb.module.weight.cpu()[:]
th.distributed.barrier()
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
@unittest.skipIf(F.ctx().type == 'gpu', reason='cpu only test')
@pytest.mark.parametrize("num_workers", [2, 4])
def test_multiprocess_cpu_sparse_adam(num_workers):
backend = 'gloo'
worker_list = []
num_embs=128
emb_dim=10
dgl_weight = th.empty((num_embs, emb_dim))
ctx = mp.get_context('spawn')
for i in range(num_workers):
device = F.ctx()
p = ctx.Process(target=start_sparse_adam_worker,
args=(i, device, num_workers, dgl_weight, th.device('cpu'), True, backend))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
worker_list = []
torch_weight = th.empty((num_embs, emb_dim))
for i in range(num_workers):
p = ctx.Process(target=start_torch_adam_worker,
args=(i, num_workers, torch_weight, False))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
assert F.allclose(dgl_weight, torch_weight)
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
@unittest.skipIf(F.ctx().type == 'cpu', reason='gpu only test')
@pytest.mark.parametrize("num_workers", [2, 4, 8])
@pytest.mark.parametrize("backend", ['nccl', 'gloo'])
def test_multiprocess_sparse_adam(num_workers, backend):
if F.ctx().type == 'cuda' and th.cuda.device_count() < num_workers:
pytest.skip("Not enough GPUs to run test.")
worker_list = []
num_embs=128
emb_dim=10
dgl_weight = th.empty((num_embs, emb_dim))
ctx = mp.get_context('spawn')
for i in range(num_workers):
device = F.ctx()
if device.type == 'cuda':
# make sure each process has a unique GPU
device = th.device(i)
p = ctx.Process(target=start_sparse_adam_worker,
args=(i, device, num_workers, dgl_weight, th.device('cpu'), True, backend))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
worker_list = []
torch_weight = th.empty((num_embs, emb_dim))
for i in range(num_workers):
p = ctx.Process(target=start_torch_adam_worker,
args=(i, num_workers, torch_weight, False))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
assert F.allclose(dgl_weight, torch_weight)
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
@unittest.skipIf(F.ctx().type == 'cpu', reason='cuda tensor is not supported for cpu')
@pytest.mark.parametrize("num_workers", [2, 4, 8])
def test_multiprocess_sparse_adam_cuda_tensor(num_workers):
if F.ctx().type == 'cpu':
pytest.skip("Do not test CPU")
if F.ctx().type == 'cuda' and th.cuda.device_count() < num_workers:
pytest.skip("Not enough GPUs to run test.")
backend = 'nccl'
worker_list = []
num_embs=128
emb_dim=10
dgl_weight = th.empty((num_embs, emb_dim))
ctx = mp.get_context('spawn')
for i in range(num_workers):
device = th.device(i)
p = ctx.Process(target=start_sparse_adam_worker,
args=(i, device, num_workers, dgl_weight, device, False, backend))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
worker_list = []
torch_weight = th.empty((num_embs, emb_dim))
for i in range(num_workers):
p = ctx.Process(target=start_torch_adam_worker,
args=(i, num_workers, torch_weight, False))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
assert F.allclose(dgl_weight, torch_weight)
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
@unittest.skipIf(F.ctx().type == 'gpu', reason='cpu only test')
@pytest.mark.parametrize("num_workers", [2, 4])
def test_multiprocess_sparse_adam_cpu_zero_step(num_workers):
backend = 'gloo'
worker_list = []
num_embs=128
emb_dim=10
dgl_weight = th.empty((num_embs, emb_dim))
ctx = mp.get_context('spawn')
for i in range(num_workers):
device = F.ctx()
p = ctx.Process(target=start_sparse_adam_worker,
args=(i, device, num_workers, dgl_weight, th.device('cpu'), True, backend))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
worker_list = []
torch_weight = th.empty((num_embs, emb_dim))
for i in range(num_workers):
p = ctx.Process(target=start_torch_adam_worker,
args=(i, num_workers, torch_weight, False))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
assert F.allclose(dgl_weight, torch_weight)
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
@unittest.skipIf(F.ctx().type == 'cpu', reason='gpu only test')
@pytest.mark.parametrize("num_workers", [2, 4, 8])
@pytest.mark.parametrize("backend", ['nccl', 'gloo'])
def test_multiprocess_sparse_adam_zero_step(num_workers, backend):
if F.ctx().type == 'cuda' and th.cuda.device_count() < num_workers:
pytest.skip("Not enough GPUs to run test.")
worker_list = []
num_embs=128
emb_dim=10
dgl_weight = th.empty((num_embs, emb_dim))
ctx = mp.get_context('spawn')
for i in range(num_workers):
device = F.ctx()
if device.type == 'cuda':
# make sure each process has a unique GPU
device = th.device(i)
p = ctx.Process(target=start_sparse_adam_worker,
args=(i, device, num_workers, dgl_weight, th.device('cpu'), True, backend))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
worker_list = []
torch_weight = th.empty((num_embs, emb_dim))
for i in range(num_workers):
p = ctx.Process(target=start_torch_adam_worker,
args=(i, num_workers, torch_weight, False))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
assert F.allclose(dgl_weight, torch_weight)
@unittest.skipIf(os.name == 'nt', reason='Do not support windows yet')
@unittest.skipIf(F.ctx().type == 'cpu', reason='cuda tensor is not supported for cpu')
@pytest.mark.parametrize("num_workers", [2, 4, 8])
def test_multiprocess_sparse_adam_zero_step_cuda_tensor(num_workers):
if F.ctx().type == 'cuda' and th.cuda.device_count() < num_workers:
pytest.skip("Not enough GPUs to run test.")
backend = 'nccl'
worker_list = []
num_embs=128
emb_dim=10
dgl_weight = th.empty((num_embs, emb_dim))
ctx = mp.get_context('spawn')
for i in range(num_workers):
device = th.device(i)
p = ctx.Process(target=start_sparse_adam_worker,
args=(i, device, num_workers, dgl_weight, device, True, backend))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
worker_list = []
torch_weight = th.empty((num_embs, emb_dim))
for i in range(num_workers):
p = ctx.Process(target=start_torch_adam_worker,
args=(i, num_workers, torch_weight, False))
p.start()
worker_list.append(p)
for p in worker_list:
p.join()
assert F.allclose(dgl_weight, torch_weight)
if __name__ == '__main__':
test_sparse_adam()
test_sparse_adam_zero_step()
test_multiprocess_cpu_sparse_adam(2)
test_multiprocess_cpu_sparse_adam(4)
test_multiprocess_cpu_sparse_adam(8)
test_multiprocess_sparse_adam_cpu_zero_step(2)
test_multiprocess_sparse_adam(2, backend='gloo')
test_multiprocess_sparse_adam(4, backend='gloo')
test_multiprocess_sparse_adam(8, backend='gloo')
test_multiprocess_sparse_adam(2, backend='nccl')
test_multiprocess_sparse_adam(4, backend='nccl')
test_multiprocess_sparse_adam(8, backend='nccl')
test_multiprocess_sparse_adam_zero_step(2, backend='gloo')
test_multiprocess_sparse_adam_zero_step(4, backend='nccl')
test_multiprocess_sparse_adam_cuda_tensor(2)
test_multiprocess_sparse_adam_zero_step_cuda_tensor(4)