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xiang song(charlie.song) 453d358d2c [Doc] Fix docs for sparse optimizer (#2680)
Co-authored-by: Ubuntu <ubuntu@ip-172-31-56-220.ec2.internal>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2021-02-19 14:07:35 +08:00

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6.6 KiB
Python

"""Torch NodeEmbedding."""
from datetime import timedelta
import torch as th
from ...backend import pytorch as F
from ...utils import get_shared_mem_array, create_shared_mem_array
_STORE = None
class NodeEmbedding: # NodeEmbedding
'''Class for storing node embeddings.
The class is optimized for training large-scale node embeddings. It updates the embedding in
a sparse way and can scale to graphs with millions of nodes. It also supports partitioning
to multiple GPUs (on a single machine) for more acceleration. It does not support partitioning
across machines.
Currently, DGL provides two optimizers that work with this NodeEmbedding
class: ``SparseAdagrad`` and ``SparseAdam``.
The implementation is based on torch.distributed package. It depends on the pytorch
default distributed process group to collect multi-process information and uses
``torch.distributed.TCPStore`` to share meta-data information across multiple gpu processes.
It use the local address of '127.0.0.1:12346' to initialize the TCPStore.
NOTE: The support of NodeEmbedding is experimental.
Parameters
----------
num_embeddings : int
The number of embeddings. Currently, the number of embeddings has to be the same as
the number of nodes.
embedding_dim : int
The dimension size of embeddings.
name : str
The name of the embeddings. The name should uniquely identify the embeddings in the system.
init_func : callable, optional
The function to create the initial data. If the init function is not provided,
the values of the embeddings are initialized to zero.
Examples
--------
Before launching multiple gpu processes
>>> def initializer(emb):
th.nn.init.xavier_uniform_(emb)
return emb
In each training process
>>> emb = dgl.nn.NodeEmbedding(g.number_of_nodes(), 10, 'emb', init_func=initializer)
>>> optimizer = dgl.optim.SparseAdam([emb], lr=0.001)
>>> for blocks in dataloader:
... ...
... feats = emb(nids, gpu_0)
... loss = F.sum(feats + 1, 0)
... loss.backward()
... optimizer.step()
'''
def __init__(self, num_embeddings, embedding_dim, name,
init_func=None):
global _STORE
# Check whether it is multi-gpu training or not.
if th.distributed.is_initialized():
rank = th.distributed.get_rank()
world_size = th.distributed.get_world_size()
else:
rank = -1
world_size = 0
self._rank = rank
self._world_size = world_size
host_name = '127.0.0.1'
port = 12346
if rank <= 0:
emb = create_shared_mem_array(name, (num_embeddings, embedding_dim), th.float32)
if init_func is not None:
emb = init_func(emb)
if rank == 0: # the master gpu process
# for multi-gpu training, setup a TCPStore for
# embeding status synchronization across GPU processes
if _STORE is None:
_STORE = th.distributed.TCPStore(
host_name, port, world_size, True, timedelta(seconds=30))
for _ in range(1, world_size):
# send embs
_STORE.set(name, name)
elif rank > 0:
# receive
if _STORE is None:
_STORE = th.distributed.TCPStore(
host_name, port, world_size, False, timedelta(seconds=30))
_STORE.wait([name])
emb = get_shared_mem_array(name, (num_embeddings, embedding_dim), th.float32)
self._store = _STORE
self._tensor = emb
self._num_embeddings = num_embeddings
self._embedding_dim = embedding_dim
self._name = name
self._optm_state = None # track optimizer state
self._trace = [] # track minibatch
def __call__(self, node_ids, device=th.device('cpu')):
"""
node_ids : th.tensor
Index of the embeddings to collect.
device : th.device
Target device to put the collected embeddings.
"""
emb = self._tensor[node_ids].to(device)
if F.is_recording():
emb = F.attach_grad(emb)
self._trace.append((node_ids.to(device, non_blocking=True), emb))
return emb
@property
def store(self):
"""Return torch.distributed.TCPStore for
meta data sharing across processes.
Returns
-------
torch.distributed.TCPStore
KVStore used for meta data sharing.
"""
return self._store
@property
def rank(self):
"""Return rank of current process.
Returns
-------
int
The rank of current process.
"""
return self._rank
@property
def world_size(self):
"""Return world size of the pytorch distributed training env.
Returns
-------
int
The world size of the pytorch distributed training env.
"""
return self._world_size
@property
def name(self):
"""Return the name of NodeEmbedding.
Returns
-------
str
The name of NodeEmbedding.
"""
return self._name
@property
def num_embeddings(self):
"""Return the number of embeddings.
Returns
-------
int
The number of embeddings.
"""
return self._num_embeddings
def set_optm_state(self, state):
"""Store the optimizer related state tensor.
Parameters
----------
state : tuple of torch.Tensor
Optimizer related state.
"""
self._optm_state = state
@property
def optm_state(self):
"""Return the optimizer related state tensor.
Returns
-------
tuple of torch.Tensor
The optimizer related state.
"""
return self._optm_state
@property
def trace(self):
"""Return a trace of the indices of embeddings
used in the training step(s).
Returns
-------
[torch.Tensor]
The indices of embeddings used in the training step(s).
"""
return self._trace
def reset_trace(self):
"""Clean up the trace of the indices of embeddings
used in the training step(s).
"""
self._trace = []
@property
def emb_tensor(self):
"""Return the tensor storing the node embeddings
Returns
-------
torch.Tensor
The tensor storing the node embeddings
"""
return self._tensor