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xiang song(charlie.song) 1e3fcc7c53 update comments (#2132)
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
2020-08-31 13:23:43 +08:00

417 行
18 KiB
Python

"""Training GCMC model on the MovieLens data set by mini-batch sampling.
The script loads the full graph in CPU and samples subgraphs for computing
gradients on the training device. The script also supports multi-GPU for
further acceleration.
"""
import os, time
import argparse
import logging
import random
import string
import traceback
import numpy as np
import tqdm
import torch as th
import torch.nn as nn
import torch.multiprocessing as mp
from torch.utils.data import DataLoader
from torch.multiprocessing import Queue
from torch.nn.parallel import DistributedDataParallel
from _thread import start_new_thread
from functools import wraps
from data import MovieLens
from model import GCMCLayer, DenseBiDecoder, BiDecoder
from utils import get_activation, get_optimizer, torch_total_param_num, torch_net_info, MetricLogger, to_etype_name
import dgl
class Net(nn.Module):
def __init__(self, args, dev_id):
super(Net, self).__init__()
self._act = get_activation(args.model_activation)
self.encoder = GCMCLayer(args.rating_vals,
args.src_in_units,
args.dst_in_units,
args.gcn_agg_units,
args.gcn_out_units,
args.gcn_dropout,
args.gcn_agg_accum,
agg_act=self._act,
share_user_item_param=args.share_param,
device=dev_id)
if args.mix_cpu_gpu and args.use_one_hot_fea:
# if use_one_hot_fea, user and movie feature is None
# W can be extremely large, with mix_cpu_gpu W should be stored in CPU
self.encoder.partial_to(dev_id)
else:
self.encoder.to(dev_id)
self.decoder = BiDecoder(in_units=args.gcn_out_units,
num_classes=len(args.rating_vals),
num_basis=args.gen_r_num_basis_func)
self.decoder.to(dev_id)
def forward(self, compact_g, frontier, ufeat, ifeat, possible_rating_values):
user_out, movie_out = self.encoder(frontier, ufeat, ifeat)
pred_ratings = self.decoder(compact_g, user_out, movie_out)
return pred_ratings
def load_subtensor(input_nodes, pair_graph, blocks, dataset, parent_graph):
output_nodes = pair_graph.ndata[dgl.NID]
head_feat = input_nodes['user'] if dataset.user_feature is None else \
dataset.user_feature[input_nodes['user']]
tail_feat = input_nodes['movie'] if dataset.movie_feature is None else \
dataset.movie_feature[input_nodes['movie']]
for block in blocks:
block.dstnodes['user'].data['ci'] = \
parent_graph.nodes['user'].data['ci'][block.dstnodes['user'].data[dgl.NID]]
block.srcnodes['user'].data['cj'] = \
parent_graph.nodes['user'].data['cj'][block.srcnodes['user'].data[dgl.NID]]
block.dstnodes['movie'].data['ci'] = \
parent_graph.nodes['movie'].data['ci'][block.dstnodes['movie'].data[dgl.NID]]
block.srcnodes['movie'].data['cj'] = \
parent_graph.nodes['movie'].data['cj'][block.srcnodes['movie'].data[dgl.NID]]
return head_feat, tail_feat, blocks
def flatten_etypes(pair_graph, dataset, segment):
n_users = pair_graph.number_of_nodes('user')
n_movies = pair_graph.number_of_nodes('movie')
src = []
dst = []
labels = []
ratings = []
for rating in dataset.possible_rating_values:
src_etype, dst_etype = pair_graph.edges(order='eid', etype=to_etype_name(rating))
src.append(src_etype)
dst.append(dst_etype)
label = np.searchsorted(dataset.possible_rating_values, rating)
ratings.append(th.LongTensor(np.full_like(src_etype, rating)))
labels.append(th.LongTensor(np.full_like(src_etype, label)))
src = th.cat(src)
dst = th.cat(dst)
ratings = th.cat(ratings)
labels = th.cat(labels)
flattened_pair_graph = dgl.heterograph({
('user', 'rate', 'movie'): (src, dst)},
num_nodes_dict={'user': n_users, 'movie': n_movies})
flattened_pair_graph.edata['rating'] = ratings
flattened_pair_graph.edata['label'] = labels
return flattened_pair_graph
def evaluate(args, dev_id, net, dataset, dataloader, segment='valid'):
possible_rating_values = dataset.possible_rating_values
nd_possible_rating_values = th.FloatTensor(possible_rating_values).to(dev_id)
real_pred_ratings = []
true_rel_ratings = []
for input_nodes, pair_graph, blocks in dataloader:
head_feat, tail_feat, blocks = load_subtensor(
input_nodes, pair_graph, blocks, dataset,
dataset.valid_enc_graph if segment == 'valid' else dataset.test_enc_graph)
frontier = blocks[0]
true_relation_ratings = \
dataset.valid_truths[pair_graph.edata[dgl.EID]] if segment == 'valid' else \
dataset.test_truths[pair_graph.edata[dgl.EID]]
frontier = frontier.to(dev_id)
head_feat = head_feat.to(dev_id)
tail_feat = tail_feat.to(dev_id)
pair_graph = pair_graph.to(dev_id)
with th.no_grad():
pred_ratings = net(pair_graph, frontier,
head_feat, tail_feat, possible_rating_values)
batch_pred_ratings = (th.softmax(pred_ratings, dim=1) *
nd_possible_rating_values.view(1, -1)).sum(dim=1)
real_pred_ratings.append(batch_pred_ratings)
true_rel_ratings.append(true_relation_ratings)
real_pred_ratings = th.cat(real_pred_ratings, dim=0)
true_rel_ratings = th.cat(true_rel_ratings, dim=0).to(dev_id)
rmse = ((real_pred_ratings - true_rel_ratings) ** 2.).mean().item()
rmse = np.sqrt(rmse)
return rmse
# According to https://github.com/pytorch/pytorch/issues/17199, this decorator
# is necessary to make fork() and openmp work together.
def thread_wrapped_func(func):
"""
Wraps a process entry point to make it work with OpenMP.
"""
@wraps(func)
def decorated_function(*args, **kwargs):
queue = Queue()
def _queue_result():
exception, trace, res = None, None, None
try:
res = func(*args, **kwargs)
except Exception as e:
exception = e
trace = traceback.format_exc()
queue.put((res, exception, trace))
start_new_thread(_queue_result, ())
result, exception, trace = queue.get()
if exception is None:
return result
else:
assert isinstance(exception, Exception)
raise exception.__class__(trace)
return decorated_function
def config():
parser = argparse.ArgumentParser(description='GCMC')
parser.add_argument('--seed', default=123, type=int)
parser.add_argument('--gpu', type=str, default='0')
parser.add_argument('--save_dir', type=str, help='The saving directory')
parser.add_argument('--save_id', type=int, help='The saving log id')
parser.add_argument('--silent', action='store_true')
parser.add_argument('--data_name', default='ml-1m', type=str,
help='The dataset name: ml-100k, ml-1m, ml-10m')
parser.add_argument('--data_test_ratio', type=float, default=0.1) ## for ml-100k the test ration is 0.2
parser.add_argument('--data_valid_ratio', type=float, default=0.1)
parser.add_argument('--use_one_hot_fea', action='store_true', default=False)
parser.add_argument('--model_activation', type=str, default="leaky")
parser.add_argument('--gcn_dropout', type=float, default=0.7)
parser.add_argument('--gcn_agg_norm_symm', type=bool, default=True)
parser.add_argument('--gcn_agg_units', type=int, default=500)
parser.add_argument('--gcn_agg_accum', type=str, default="sum")
parser.add_argument('--gcn_out_units', type=int, default=75)
parser.add_argument('--gen_r_num_basis_func', type=int, default=2)
parser.add_argument('--train_max_epoch', type=int, default=1000)
parser.add_argument('--train_log_interval', type=int, default=1)
parser.add_argument('--train_valid_interval', type=int, default=1)
parser.add_argument('--train_optimizer', type=str, default="adam")
parser.add_argument('--train_grad_clip', type=float, default=1.0)
parser.add_argument('--train_lr', type=float, default=0.01)
parser.add_argument('--train_min_lr', type=float, default=0.0001)
parser.add_argument('--train_lr_decay_factor', type=float, default=0.5)
parser.add_argument('--train_decay_patience', type=int, default=25)
parser.add_argument('--train_early_stopping_patience', type=int, default=50)
parser.add_argument('--share_param', default=False, action='store_true')
parser.add_argument('--mix_cpu_gpu', default=False, action='store_true')
parser.add_argument('--minibatch_size', type=int, default=20000)
parser.add_argument('--num_workers_per_gpu', type=int, default=8)
args = parser.parse_args()
### configure save_fir to save all the info
if args.save_dir is None:
args.save_dir = args.data_name+"_" + ''.join(random.choices(string.ascii_uppercase + string.digits, k=2))
if args.save_id is None:
args.save_id = np.random.randint(20)
args.save_dir = os.path.join("log", args.save_dir)
if not os.path.isdir(args.save_dir):
os.makedirs(args.save_dir)
return args
def run(proc_id, n_gpus, args, devices, dataset):
dev_id = devices[proc_id]
train_labels = dataset.train_labels
train_truths = dataset.train_truths
num_edges = train_truths.shape[0]
reverse_types = {to_etype_name(k): 'rev-' + to_etype_name(k)
for k in dataset.possible_rating_values}
reverse_types.update({v: k for k, v in reverse_types.items()})
sampler = dgl.dataloading.MultiLayerNeighborSampler([None], return_eids=True)
dataloader = dgl.dataloading.EdgeDataLoader(
dataset.train_enc_graph,
{to_etype_name(k): th.arange(
dataset.train_enc_graph.number_of_edges(etype=to_etype_name(k)))
for k in dataset.possible_rating_values},
sampler,
batch_size=args.minibatch_size,
shuffle=True,
drop_last=False)
if proc_id == 0:
valid_dataloader = dgl.dataloading.EdgeDataLoader(
dataset.valid_dec_graph,
th.arange(dataset.valid_dec_graph.number_of_edges()),
sampler,
g_sampling=dataset.valid_enc_graph,
batch_size=args.minibatch_size,
shuffle=False,
drop_last=False)
test_dataloader = dgl.dataloading.EdgeDataLoader(
dataset.test_dec_graph,
th.arange(dataset.test_dec_graph.number_of_edges()),
sampler,
g_sampling=dataset.test_enc_graph,
batch_size=args.minibatch_size,
shuffle=False,
drop_last=False)
if n_gpus > 1:
dist_init_method = 'tcp://{master_ip}:{master_port}'.format(
master_ip='127.0.0.1', master_port='12345')
world_size = n_gpus
th.distributed.init_process_group(backend="nccl",
init_method=dist_init_method,
world_size=world_size,
rank=dev_id)
if n_gpus > 0:
th.cuda.set_device(dev_id)
nd_possible_rating_values = \
th.FloatTensor(dataset.possible_rating_values)
nd_possible_rating_values = nd_possible_rating_values.to(dev_id)
net = Net(args=args, dev_id=dev_id)
net = net.to(dev_id)
if n_gpus > 1:
net = DistributedDataParallel(net, device_ids=[dev_id], output_device=dev_id)
rating_loss_net = nn.CrossEntropyLoss()
learning_rate = args.train_lr
optimizer = get_optimizer(args.train_optimizer)(net.parameters(), lr=learning_rate)
print("Loading network finished ...\n")
### declare the loss information
best_valid_rmse = np.inf
no_better_valid = 0
best_epoch = -1
count_rmse = 0
count_num = 0
count_loss = 0
print("Start training ...")
dur = []
iter_idx = 1
for epoch in range(1, args.train_max_epoch):
if epoch > 1:
t0 = time.time()
net.train()
with tqdm.tqdm(dataloader) as tq:
for step, (input_nodes, pair_graph, blocks) in enumerate(tq):
head_feat, tail_feat, blocks = load_subtensor(
input_nodes, pair_graph, blocks, dataset, dataset.train_enc_graph)
frontier = blocks[0]
compact_g = flatten_etypes(pair_graph, dataset, 'train').to(dev_id)
true_relation_labels = compact_g.edata['label']
true_relation_ratings = compact_g.edata['rating']
head_feat = head_feat.to(dev_id)
tail_feat = tail_feat.to(dev_id)
frontier = frontier.to(dev_id)
pred_ratings = net(compact_g, frontier, head_feat, tail_feat, dataset.possible_rating_values)
loss = rating_loss_net(pred_ratings, true_relation_labels.to(dev_id)).mean()
count_loss += loss.item()
optimizer.zero_grad()
loss.backward()
nn.utils.clip_grad_norm_(net.parameters(), args.train_grad_clip)
optimizer.step()
if proc_id == 0 and iter_idx == 1:
print("Total #Param of net: %d" % (torch_total_param_num(net)))
real_pred_ratings = (th.softmax(pred_ratings, dim=1) *
nd_possible_rating_values.view(1, -1)).sum(dim=1)
rmse = ((real_pred_ratings - true_relation_ratings.to(dev_id)) ** 2).sum()
count_rmse += rmse.item()
count_num += pred_ratings.shape[0]
tq.set_postfix({'loss': '{:.4f}'.format(count_loss / iter_idx),
'rmse': '{:.4f}'.format(count_rmse / count_num)},
refresh=False)
iter_idx += 1
if epoch > 1:
epoch_time = time.time() - t0
print("Epoch {} time {}".format(epoch, epoch_time))
if epoch % args.train_valid_interval == 0:
if n_gpus > 1:
th.distributed.barrier()
if proc_id == 0:
valid_rmse = evaluate(args=args,
dev_id=dev_id,
net=net,
dataset=dataset,
dataloader=valid_dataloader,
segment='valid')
logging_str = 'Val RMSE={:.4f}'.format(valid_rmse)
if valid_rmse < best_valid_rmse:
best_valid_rmse = valid_rmse
no_better_valid = 0
best_epoch = epoch
test_rmse = evaluate(args=args,
dev_id=dev_id,
net=net,
dataset=dataset,
dataloader=test_dataloader,
segment='test')
best_test_rmse = test_rmse
logging_str += ', Test RMSE={:.4f}'.format(test_rmse)
else:
no_better_valid += 1
if no_better_valid > args.train_early_stopping_patience\
and learning_rate <= args.train_min_lr:
logging.info("Early stopping threshold reached. Stop training.")
break
if no_better_valid > args.train_decay_patience:
new_lr = max(learning_rate * args.train_lr_decay_factor, args.train_min_lr)
if new_lr < learning_rate:
logging.info("\tChange the LR to %g" % new_lr)
learning_rate = new_lr
for p in optimizer.param_groups:
p['lr'] = learning_rate
no_better_valid = 0
print("Change the LR to %g" % new_lr)
# sync on evalution
if n_gpus > 1:
th.distributed.barrier()
print(logging_str)
if proc_id == 0:
print('Best epoch Idx={}, Best Valid RMSE={:.4f}, Best Test RMSE={:.4f}'.format(
best_epoch, best_valid_rmse, best_test_rmse))
if __name__ == '__main__':
args = config()
devices = list(map(int, args.gpu.split(',')))
n_gpus = len(devices)
# For GCMC based on sampling, we require node has its own features.
# Otherwise (node_id is the feature), the model can not scale
dataset = MovieLens(args.data_name,
'cpu',
mix_cpu_gpu=args.mix_cpu_gpu,
use_one_hot_fea=args.use_one_hot_fea,
symm=args.gcn_agg_norm_symm,
test_ratio=args.data_test_ratio,
valid_ratio=args.data_valid_ratio)
print("Loading data finished ...\n")
args.src_in_units = dataset.user_feature_shape[1]
args.dst_in_units = dataset.movie_feature_shape[1]
args.rating_vals = dataset.possible_rating_values
# cpu
if devices[0] == -1:
run(0, 0, args, ['cpu'], dataset)
# gpu
elif n_gpus == 1:
run(0, n_gpus, args, devices, dataset)
# multi gpu
else:
# Create csr/coo/csc formats before launching training processes with multi-gpu.
# This avoids creating certain formats in each sub-process, which saves momory and CPU.
dataset.train_enc_graph.create_formats_()
dataset.train_dec_graph.create_formats_()
procs = []
for proc_id in range(n_gpus):
p = mp.Process(target=thread_wrapped_func(run), args=(proc_id, n_gpus, args, devices, dataset))
p.start()
procs.append(p)
for p in procs:
p.join()