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Zihao Ye 93ac29ce34 [Refactor] Unify DGLGraph, BatchedDGLGraph and DGLSubGraph (#1216)
* upd

* upd

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* lint

* fix

* fix test

* fix

* fix

* upd

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* upd tutorial

* upd

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* fix kg

* upd doc organization

* refresh test

* upd

* refactor doc

* fix lint

Co-authored-by: Minjie Wang <minjie.wang@nyu.edu>
2020-03-05 18:03:57 +08:00

128 行
4.8 KiB
Python

"""Torch Module for Chebyshev Spectral Graph Convolution layer"""
# pylint: disable= no-member, arguments-differ, invalid-name
import torch as th
from torch import nn
from torch.nn import init
from .... import laplacian_lambda_max, broadcast_nodes, function as fn
class ChebConv(nn.Module):
r"""Chebyshev Spectral Graph Convolution layer from paper `Convolutional
Neural Networks on Graphs with Fast Localized Spectral Filtering
<https://arxiv.org/pdf/1606.09375.pdf>`__.
.. math::
h_i^{l+1} &= \sum_{k=0}^{K-1} W^{k, l}z_i^{k, l}
Z^{0, l} &= H^{l}
Z^{1, l} &= \hat{L} \cdot H^{l}
Z^{k, l} &= 2 \cdot \hat{L} \cdot Z^{k-1, l} - Z^{k-2, l}
\hat{L} &= 2\left(I - \hat{D}^{-1/2} \hat{A} \hat{D}^{-1/2}\right)/\lambda_{max} - I
Parameters
----------
in_feats: int
Number of input features.
out_feats: int
Number of output features.
k : int
Chebyshev filter size.
bias : bool, optional
If True, adds a learnable bias to the output. Default: ``True``.
"""
def __init__(self,
in_feats,
out_feats,
k,
bias=True):
super(ChebConv, self).__init__()
self._in_feats = in_feats
self._out_feats = out_feats
self.fc = nn.ModuleList([
nn.Linear(in_feats, out_feats, bias=False) for _ in range(k)
])
self._k = k
if bias:
self.bias = nn.Parameter(th.Tensor(out_feats))
else:
self.register_buffer('bias', None)
self.reset_parameters()
def reset_parameters(self):
"""Reinitialize learnable parameters."""
if self.bias is not None:
init.zeros_(self.bias)
for module in self.fc.modules():
if isinstance(module, nn.Linear):
init.xavier_normal_(module.weight, init.calculate_gain('relu'))
if module.bias is not None:
init.zeros_(module.bias)
def forward(self, graph, feat, lambda_max=None):
r"""Compute ChebNet layer.
Parameters
----------
graph : DGLGraph
The graph.
feat : torch.Tensor
The input feature of shape :math:`(N, D_{in})` where :math:`D_{in}`
is size of input feature, :math:`N` is the number of nodes.
lambda_max : list or tensor or None, optional.
A list(tensor) with length :math:`B`, stores the largest eigenvalue
of the normalized laplacian of each individual graph in ``graph``,
where :math:`B` is the batch size of the input graph. Default: None.
If None, this method would compute the list by calling
``dgl.laplacian_lambda_max``.
Returns
-------
torch.Tensor
The output feature of shape :math:`(N, D_{out})` where :math:`D_{out}`
is size of output feature.
"""
with graph.local_scope():
norm = th.pow(
graph.in_degrees().float().clamp(min=1), -0.5).unsqueeze(-1).to(feat.device)
if lambda_max is None:
lambda_max = laplacian_lambda_max(graph)
if isinstance(lambda_max, list):
lambda_max = th.Tensor(lambda_max).to(feat.device)
if lambda_max.dim() == 1:
lambda_max = lambda_max.unsqueeze(-1) # (B,) to (B, 1)
# broadcast from (B, 1) to (N, 1)
lambda_max = broadcast_nodes(graph, lambda_max)
# T0(X)
Tx_0 = feat
rst = self.fc[0](Tx_0)
# T1(X)
if self._k > 1:
graph.ndata['h'] = Tx_0 * norm
graph.update_all(fn.copy_u('h', 'm'), fn.sum('m', 'h'))
h = graph.ndata.pop('h') * norm
# Λ = 2 * (I - D ^ -1/2 A D ^ -1/2) / lambda_max - I
# = - 2(D ^ -1/2 A D ^ -1/2) / lambda_max + (2 / lambda_max - 1) I
Tx_1 = -2. * h / lambda_max + Tx_0 * (2. / lambda_max - 1)
rst = rst + self.fc[1](Tx_1)
# Ti(x), i = 2...k
for i in range(2, self._k):
graph.ndata['h'] = Tx_1 * norm
graph.update_all(fn.copy_u('h', 'm'), fn.sum('m', 'h'))
h = graph.ndata.pop('h') * norm
# Tx_k = 2 * Λ * Tx_(k-1) - Tx_(k-2)
# = - 4(D ^ -1/2 A D ^ -1/2) / lambda_max Tx_(k-1) +
# (4 / lambda_max - 2) Tx_(k-1) -
# Tx_(k-2)
Tx_2 = -4. * h / lambda_max + Tx_1 * (4. / lambda_max - 2) - Tx_0
rst = rst + self.fc[i](Tx_2)
Tx_1, Tx_0 = Tx_2, Tx_1
# add bias
if self.bias is not None:
rst = rst + self.bias
return rst