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Zihao Ye af61e2fbb4 [Feature] Support nn modules for bipartite graphs. (#1392)
* init gat

* fix

* gin

* 7 nn modules

* rename & lint

* upd

* upd

* fix lint

* upd test

* upd

* lint

* shape check

* upd

* lint

* address comments

* update tensorflow

Co-authored-by: Quan Gan <coin2028@hotmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
2020-03-29 16:48:38 +08:00

76 行
2.6 KiB
Python

"""MXNet Module for Attention-based Graph Neural Network layer"""
# pylint: disable= no-member, arguments-differ, invalid-name
import mxnet as mx
from mxnet.gluon import nn
from .... import function as fn
from ..softmax import edge_softmax
from ..utils import normalize
from ....utils import expand_as_pair
class AGNNConv(nn.Block):
r"""Attention-based Graph Neural Network layer from paper `Attention-based
Graph Neural Network for Semi-Supervised Learning
<https://arxiv.org/abs/1803.03735>`__.
.. math::
H^{l+1} = P H^{l}
where :math:`P` is computed as:
.. math::
P_{ij} = \mathrm{softmax}_i ( \beta \cdot \cos(h_i^l, h_j^l))
Parameters
----------
init_beta : float, optional
The :math:`\beta` in the formula.
learn_beta : bool, optional
If True, :math:`\beta` will be learnable parameter.
"""
def __init__(self,
init_beta=1.,
learn_beta=True):
super(AGNNConv, self).__init__()
with self.name_scope():
self.beta = self.params.get('beta',
shape=(1,),
grad_req='write' if learn_beta else 'null',
init=mx.init.Constant(init_beta))
def forward(self, graph, feat):
r"""Compute AGNN Layer.
Parameters
----------
graph : DGLGraph
The graph.
feat : mxnet.NDArray
The input feature of shape :math:`(N, *)` :math:`N` is the
number of nodes, and :math:`*` could be of any shape.
If a pair of mxnet.NDArray is given, the pair must contain two tensors of shape
:math:`(N_{in}, *)` and :math:`(N_{out}, *})`, the the :math:`*` in the later
tensor must equal the previous one.
Returns
-------
mxnet.NDArray
The output feature of shape :math:`(N, *)` where :math:`*`
should be the same as input shape.
"""
graph = graph.local_var()
feat_src, feat_dst = expand_as_pair(feat)
graph.srcdata['h'] = feat_src
graph.srcdata['norm_h'] = normalize(feat_src, p=2, axis=-1)
if isinstance(feat, tuple):
graph.dstdata['norm_h'] = normalize(feat_dst, p=2, axis=-1)
# compute cosine distance
graph.apply_edges(fn.u_dot_v('norm_h', 'norm_h', 'cos'))
cos = graph.edata.pop('cos')
e = self.beta.data(feat_src.context) * cos
graph.edata['p'] = edge_softmax(graph, e)
graph.update_all(fn.u_mul_e('h', 'p', 'm'), fn.sum('m', 'h'))
return graph.dstdata.pop('h')