dmlc--dgl
635dfb4a59
* update metis * update * update dataloader * update dataloader * new script * update * update * update * update * update * update * update * update dataloader * update * update * update * update * update * update * update * Add license to every filer header
285 行
13 KiB
Python
285 行
13 KiB
Python
# -*- coding: utf-8 -*-
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#
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# setup.py
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#
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# Copyright 2018 Amazon.com, Inc. or its affiliates. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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import os
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import argparse
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import time
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import logging
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import socket
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if os.name != 'nt':
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import fcntl
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import struct
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import torch.multiprocessing as mp
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from train_pytorch import load_model, dist_train_test
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from utils import get_compatible_batch_size
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from train import get_logger
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from dataloader import TrainDataset, NewBidirectionalOneShotIterator
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from dataloader import get_dataset, get_partition_dataset
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import dgl
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import dgl.backend as F
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WAIT_TIME = 10
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class ArgParser(argparse.ArgumentParser):
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def __init__(self):
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super(ArgParser, self).__init__()
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self.add_argument('--model_name', default='TransE',
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choices=['TransE', 'TransE_l1', 'TransE_l2', 'TransR',
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'RESCAL', 'DistMult', 'ComplEx', 'RotatE'],
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help='model to use')
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self.add_argument('--data_path', type=str, default='../data',
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help='root path of all dataset')
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self.add_argument('--dataset', type=str, default='FB15k',
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help='dataset name, under data_path')
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self.add_argument('--format', type=str, default='built_in',
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help='the format of the dataset, it can be built_in,'\
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'raw_udd_{htr} and udd_{htr}')
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self.add_argument('--save_path', type=str, default='../ckpts',
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help='place to save models and logs')
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self.add_argument('--save_emb', type=str, default=None,
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help='save the embeddings in the specific location.')
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self.add_argument('--max_step', type=int, default=80000,
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help='train xx steps')
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self.add_argument('--batch_size', type=int, default=1024,
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help='batch size')
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self.add_argument('--batch_size_eval', type=int, default=8,
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help='batch size used for eval and test')
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self.add_argument('--neg_sample_size', type=int, default=128,
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help='negative sampling size')
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self.add_argument('--neg_deg_sample', action='store_true',
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help='negative sample proportional to vertex degree in the training')
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self.add_argument('--neg_deg_sample_eval', action='store_true',
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help='negative sampling proportional to vertex degree in the evaluation')
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self.add_argument('--neg_sample_size_eval', type=int, default=-1,
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help='negative sampling size for evaluation')
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self.add_argument('--hidden_dim', type=int, default=256,
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help='hidden dim used by relation and entity')
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self.add_argument('--lr', type=float, default=0.0001,
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help='learning rate')
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self.add_argument('-g', '--gamma', type=float, default=12.0,
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help='margin value')
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self.add_argument('--no_eval_filter', action='store_true',
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help='do not filter positive edges among negative edges for evaluation')
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self.add_argument('--gpu', type=int, default=[-1], nargs='+',
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help='a list of active gpu ids, e.g. 0 1 2 4')
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self.add_argument('--mix_cpu_gpu', action='store_true',
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help='mix CPU and GPU training')
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self.add_argument('-de', '--double_ent', action='store_true',
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help='double entitiy dim for complex number')
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self.add_argument('-dr', '--double_rel', action='store_true',
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help='double relation dim for complex number')
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self.add_argument('-log', '--log_interval', type=int, default=1000,
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help='do evaluation after every x steps')
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self.add_argument('--eval_interval', type=int, default=10000,
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help='do evaluation after every x steps')
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self.add_argument('--eval_percent', type=float, default=1,
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help='sample some percentage for evaluation.')
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self.add_argument('-adv', '--neg_adversarial_sampling', action='store_true',
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help='if use negative adversarial sampling')
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self.add_argument('-a', '--adversarial_temperature', default=1.0, type=float,
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help='adversarial_temperature')
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self.add_argument('--valid', action='store_true',
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help='if valid a model')
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self.add_argument('--test', action='store_true',
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help='if test a model')
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self.add_argument('-rc', '--regularization_coef', type=float, default=0.000002,
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help='set value > 0.0 if regularization is used')
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self.add_argument('-rn', '--regularization_norm', type=int, default=3,
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help='norm used in regularization')
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self.add_argument('--non_uni_weight', action='store_true',
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help='if use uniform weight when computing loss')
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self.add_argument('--pickle_graph', action='store_true',
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help='pickle built graph, building a huge graph is slow.')
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self.add_argument('--num_proc', type=int, default=1,
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help='number of process used')
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self.add_argument('--num_thread', type=int, default=1,
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help='number of thread used')
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self.add_argument('--rel_part', action='store_true',
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help='enable relation partitioning')
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self.add_argument('--soft_rel_part', action='store_true',
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help='enable soft relation partition')
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self.add_argument('--async_update', action='store_true',
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help='allow async_update on node embedding')
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self.add_argument('--force_sync_interval', type=int, default=-1,
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help='We force a synchronization between processes every x steps')
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self.add_argument('--machine_id', type=int, default=0,
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help='Unique ID of current machine.')
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self.add_argument('--total_machine', type=int, default=1,
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help='Total number of machine.')
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self.add_argument('--ip_config', type=str, default='ip_config.txt',
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help='IP configuration file of kvstore')
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self.add_argument('--num_client', type=int, default=1,
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help='Number of client on each machine.')
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def get_long_tail_partition(n_relations, n_machine):
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"""Relation types has a long tail distribution for many dataset.
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So we need to average shuffle the data before we partition it.
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"""
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assert n_relations > 0, 'n_relations must be a positive number.'
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assert n_machine > 0, 'n_machine must be a positive number.'
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partition_book = [0] * n_relations
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part_id = 0
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for i in range(n_relations):
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partition_book[i] = part_id
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part_id += 1
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if part_id == n_machine:
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part_id = 0
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return partition_book
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def local_ip4_addr_list():
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"""Return a set of IPv4 address
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"""
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nic = set()
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for ix in socket.if_nameindex():
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name = ix[1]
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s = socket.socket(socket.AF_INET, socket.SOCK_DGRAM)
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ip = socket.inet_ntoa(fcntl.ioctl(
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s.fileno(),
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0x8915, # SIOCGIFADDR
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struct.pack('256s', name[:15].encode("UTF-8")))[20:24])
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nic.add(ip)
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return nic
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def get_local_machine_id(server_namebook):
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"""Get machine ID via server_namebook
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"""
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assert len(server_namebook) > 0, 'server_namebook cannot be empty.'
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res = 0
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for ID, data in server_namebook.items():
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machine_id = data[0]
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ip = data[1]
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if ip in local_ip4_addr_list():
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res = machine_id
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break
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return res
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def start_worker(args, logger):
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"""Start kvclient for training
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"""
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init_time_start = time.time()
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time.sleep(WAIT_TIME) # wait for launch script
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server_namebook = dgl.contrib.read_ip_config(filename=args.ip_config)
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args.machine_id = get_local_machine_id(server_namebook)
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dataset, entity_partition_book, local2global = get_partition_dataset(
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args.data_path,
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args.dataset,
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args.machine_id)
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n_entities = dataset.n_entities
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n_relations = dataset.n_relations
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print('Partition %d n_entities: %d' % (args.machine_id, n_entities))
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print("Partition %d n_relations: %d" % (args.machine_id, n_relations))
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entity_partition_book = F.tensor(entity_partition_book)
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relation_partition_book = get_long_tail_partition(dataset.n_relations, args.total_machine)
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relation_partition_book = F.tensor(relation_partition_book)
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local2global = F.tensor(local2global)
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relation_partition_book.share_memory_()
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entity_partition_book.share_memory_()
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local2global.share_memory_()
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train_data = TrainDataset(dataset, args, ranks=args.num_client)
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# if there is no cross partition relaiton, we fall back to strict_rel_part
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args.strict_rel_part = args.mix_cpu_gpu and (train_data.cross_part == False)
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args.soft_rel_part = args.mix_cpu_gpu and args.soft_rel_part and train_data.cross_part
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if args.neg_sample_size_eval < 0:
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args.neg_sample_size_eval = dataset.n_entities
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args.batch_size = get_compatible_batch_size(args.batch_size, args.neg_sample_size)
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args.batch_size_eval = get_compatible_batch_size(args.batch_size_eval, args.neg_sample_size_eval)
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args.num_workers = 8 # fix num_workers to 8
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train_samplers = []
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for i in range(args.num_client):
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train_sampler_head = train_data.create_sampler(args.batch_size,
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args.neg_sample_size,
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args.neg_sample_size,
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mode='head',
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num_workers=args.num_workers,
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shuffle=True,
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exclude_positive=False,
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rank=i)
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train_sampler_tail = train_data.create_sampler(args.batch_size,
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args.neg_sample_size,
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args.neg_sample_size,
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mode='tail',
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num_workers=args.num_workers,
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shuffle=True,
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exclude_positive=False,
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rank=i)
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train_samplers.append(NewBidirectionalOneShotIterator(train_sampler_head, train_sampler_tail,
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args.neg_sample_size, args.neg_sample_size,
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True, n_entities))
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dataset = None
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model = load_model(logger, args, n_entities, n_relations)
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model.share_memory()
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print('Total initialize time {:.3f} seconds'.format(time.time() - init_time_start))
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rel_parts = train_data.rel_parts if args.strict_rel_part or args.soft_rel_part else None
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cross_rels = train_data.cross_rels if args.soft_rel_part else None
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procs = []
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barrier = mp.Barrier(args.num_client)
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for i in range(args.num_client):
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proc = mp.Process(target=dist_train_test, args=(args,
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model,
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train_samplers[i],
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entity_partition_book,
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relation_partition_book,
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local2global,
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i,
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rel_parts,
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cross_rels,
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barrier))
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procs.append(proc)
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proc.start()
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for proc in procs:
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proc.join()
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if __name__ == '__main__':
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args = ArgParser().parse_args()
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logger = get_logger(args)
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start_worker(args, logger)
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