* enable sparse on windows and mac
* that was stupid
* let's see what's going on..
* [Sparse] Fix the import error on Mac OS.
When using template functions that are defined in source files from DGL,
the loader of MacOS somehow cannot find their definitions. This fix simply
avoids depending on template functions from DGL headers.
With this fix, the sparse tests all pass on the MAC environment.
* ok this is the problem
* make errors clearer
* uh
* test
* Update __init__.py
* disabling ddp on windows
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Co-authored-by: czkkkkkk <zekucai@gmail.com>
* use NotImplemented
* format
* extend to pytorch scalar
* sparse div scalar
* oops
* Apply suggestions from code review
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
* Allow reading and writing single-column vector Parquet files.
These files are commonly produced by Spark ML's feature processing code.
* [Dist] Only write single-column vector files for Parquet in tests.
* [Dist] Add support for Parquet-formatted edges files, remove some assumptions on edge file number.
* [Dist] Add parquet edges option to unit tests.
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
* Add SpatialEncoder and SpatialEncoder3d
* Optimize the code execution efficiency
* Fixed certain problems according to Dongyu's suggestions.
* Fix an error about probability of division by zero in PathEcoder; Change certain designs in SpatialEncoder
* Fix a typo
* polish the docstring
* fix doc
* lint
Co-authored-by: Ubuntu <ubuntu@ip-172-31-14-146.ap-northeast-1.compute.internal>
Co-authored-by: rudongyu <ru_dongyu@outlook.com>
* [Sparse] Support SpMM and SDDMM
* Add SDDMMAutoGrad
* Rename SpMMImpl and SDDMMImpl and move them to dgl_sparse/src/matmul.h
* Update comments
* Update
* Minor fix
* replace LooseVersion with packaging.version
* import packaging from setuptools
* import packaging.version in dgl.utils
* format
* revert changes to apps/kg
* revert changes to _dataloading
* [Dist] enable to chunk node/edge data into arbitrary number of chunks
* [Dist] enable to split node/edge data into arbitrary parts
* refine code
* Format boolean to uint8 forcely to avoid dist.scatter failure
* convert boolean to int8 before scatter and revert it after scatter
* refine code
* fix test
* refine code
* move test utilities into utils.py
* update comment
* fix empty data
* update
* update
* fix empty data issue
* release unnecessary mem
* release unnecessary mem
* release unnecessary mem
* release unnecessary mem
* release unnecessary mem
* remove unnecessary shuffle data
* separate array_split into standalone utility
* add example
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
* Add GraphTransformerLayer (dense)
* beautify the python code with black
* refine according to mufei's comments
* fix AttributeError in unit test
* rename module as GraphormerLayer
* fix name issue
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
* update agg function with new bindings
* handle optional import in __init__
* raise error in RelGraphConvAgg when pylibcugraphops not imported
* Update tests/cugraph/cugraph-ops/test_cugraph_relgraphconv.py
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
* Update tests/cugraph/cugraph-ops/test_cugraph_relgraphconv.py
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
* use keyword args for readability
* add missing docstring to pass CI
* catch ImportError rather than ModuleNotFoundError
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
* Add PathEncoder to transformer.py
* add blank line at the and
* rename variabl sp to shortest_path
* Fixed corresponding problems
* Fixed certain bugs when running on CUDA
* changed clamp min from 0 to 1
Co-authored-by: Ubuntu <ubuntu@ip-172-31-14-146.ap-northeast-1.compute.internal>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Quan (Andy) Gan