750e50372a
Efficient send_and_recv ( #83 )
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* python side send_and_recv shortcut
* common util function for c apis
* degree bucketing scheduler
* scheduler c apis
* cmake
* python side logics
* minor
* fix multiple msg/red func cases
* remove shell echo command in Jenkinsfile...
* fuse apply for send_and_recv
* fuse update func for update_all
* typo...
* handle anonymous
* add degree bucketing for entire graph
* degree bucketing executor
* minor
* style
* rename graph_mapping to recv_nodes
* fix some comments
2018-10-17 11:14:52 -04:00
b2c1c4facd
node/edge filtering ( #80 )
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* node/edge filtering
* changing to tensor operations (what did i do???)
* ???
2018-10-16 21:37:43 -04:00
16da76c4b4
fix #81
2018-10-16 10:39:50 -04:00
5567f4a4d9
[BACKEND] Add MXNet backend. ( #77 )
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* support mxnet.
* add mxnet version of GCN.
* rename mxnet.nd as F.
* add mxnet GAT.
* enable GPU for GCN.
* fix MXNet GCN train.
* Use adam to optimize GAT
* support more operators.
* support sparse arrays.
* update mxnet backend.
* support index_copy.
* remove NN.
* update mxnet backend.
* temp check in.
* fix data conversion.
* add test.
* clean up mxnet backend.
* update mxnet examples.
* Revert "remove NN."
This reverts commit d815d9a0ec619f9ce9099c48cd35db9d8e947483.
* temp disable MXNet version of NN.
2018-10-14 11:15:48 -04:00
e7679cf2e6
implement requested changes
2018-10-13 14:24:46 +08:00
eb46dc0018
Merge branch 'line-graph' of https://github.com/jermainewang/dgl into line-graph
2018-10-10 12:43:39 +08:00
0a6d720c30
fix build failure
2018-10-10 12:43:05 +08:00
4baed9645c
Merge branch 'cpp' into line-graph
2018-10-10 07:53:44 +08:00
7603b8c351
Fix dlpack bug; zero copy between dgl.ndarray and user tensor enabled
2018-10-09 11:37:59 -04:00
885f5e7313
Merge branch 'cpp' of https://github.com/jermainewang/dgl into line-graph
2018-10-09 16:08:18 +08:00
3d38c2a93e
small fix
2018-10-08 13:30:50 -04:00
baf5906bab
(non)-backtracking line graph
2018-10-08 08:04:25 +08:00
5119a50475
sparse line graph
2018-10-08 07:38:03 +08:00
cdf7334cc6
Dockerfile and CI ( #74 )
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* Test CPP branch CI (#2 )
* Fix batching node-only graphs (#62 )
* fixing batching with graphs with no edges
* oops forgot test
* fix readme
* Docker and Jenkins (#1 )
* docker ci cpu
* install python packages
* docker ci gpu
* add readme
* use dgl cpu image
* run command in container as root
* use python3
* fix test case
* remove nose from docker file
* docker folder readme
* parallelize cpu and gpu
* top level stages
* comment out python2 related installation
* fix
* remove igraph
* building for cpp
* change building order
* export env in test stage
* withEnv
* run docker container as root
* fix test cases
* fix test cases
* minor
* remove old build
2018-10-07 19:18:43 -04:00
905db29286
cpp lg
2018-10-07 22:25:45 +08:00
ec4216dda8
[MODEL] junction tree vae example ( #70 )
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* junction tree vae example
* added README and moved data to dropbox
* auto download; some fix in python3
2018-10-06 16:59:47 -04:00
596ca471a5
Merge branch 'cpp' of https://github.com/jermainewang/dgl into line-graph
2018-10-06 23:52:04 +08:00
8a6d25ae69
Resolve conflicts in python/dgl/graph.py
2018-10-06 16:13:06 +08:00
72f6345515
Fix for subgraph test and some docs
2018-10-05 23:58:42 -04:00
b0e02e5b52
Update the subgraph ( #73 )
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* update subgraph.
* update subgraph API.
* keep node embedding.
2018-10-05 22:17:33 -04:00
1209978d97
install doc
2018-10-05 16:23:55 -04:00
1b06998465
doc for batched graph
2018-10-05 15:07:42 -04:00
c7b9f06946
Init sphinx doc
2018-10-05 14:57:09 -04:00
c468e06867
some fix
2018-10-05 10:38:44 -04:00
74888fee5c
readout signature
2018-10-04 13:20:25 -04:00
26dcfb5bc2
Merge branch 'cpp' of https://github.com/jermainewang/dgl into cpp
...
Conflicts:
python/dgl/graph.py
2018-10-04 21:26:56 +08:00
cc372e3774
sbm mixture
2018-10-04 21:22:41 +08:00
fde4f581d2
gcn runnable
2018-10-03 21:05:19 -04:00
2be55fb50a
graph batch and unbatch
2018-10-03 17:07:41 -04:00
7d04c8c9f3
remove nonbatchable mode
2018-10-03 12:20:12 -04:00
a8a4fcbaff
quickly integrating with tree-lstm example
2018-09-24 23:42:56 -04:00
882e2a7be0
Graph batching. Support convert nx graph attrs
2018-09-24 21:34:51 -04:00
314a75f367
WIP: batched graph
2018-09-24 17:31:50 -04:00
79f62400fe
WIP: batch graphs
2018-09-21 14:53:25 -04:00
4aebfd7bd8
add merge graph; fix bug in from_networkx
2018-09-21 12:25:54 -04:00
7b5d4c5886
pass specialization test
2018-09-20 18:22:46 -04:00
b2e4bdc03f
passed basic test batching
2018-09-20 14:44:06 -04:00
f26ecb4909
Fix batching node-only graphs ( #62 )
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* fixing batching with graphs with no edges
* oops forgot test
2018-09-20 10:36:35 -04:00
44db98c4e0
remove nx inheritence
2018-09-19 22:49:14 -04:00
916d375ba3
Merge branch 'master' into cpp
2018-09-19 21:04:31 -04:00
a1038eb1ee
graph index
2018-09-19 21:02:15 -04:00
9b0a01db41
Support list of msg or reduce func for update_all and send_and_recv ( #58 )
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* support multiple fields in spmv
* finishing SPMV executor
* non-spmv case
* refactor code to give single mfunc rfunc a shortcut
* two test cases to test multiple msg/red func
* catching cases where msg uses anonymous field
* default ALL for update edge
* more corner case test
* print failed test
* delete print
* fix builtin max reducer
2018-09-19 20:49:29 -04:00
a81d27dc67
WIP: integrating
2018-09-19 10:52:20 -04:00
dba79f1d45
also return edge id for many APIs
2018-09-18 23:40:13 -04:00
71e6e0cd5f
python shim + some simple tests
2018-09-17 14:40:29 -04:00
758cb16e67
ndarray argument
2018-09-17 00:15:46 -04:00
c086d454d3
Use TVMContext
2018-09-16 16:56:29 -04:00
b24daa6607
change to rel import within dgl
2018-09-16 16:14:37 -04:00
842d37682b
python api
2018-09-16 15:49:11 -04:00
2694b12725
import ffi solution from TVM
2018-09-05 10:51:31 -04:00
Lingfan Yu