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peizhou/negative__patch
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118 次代码提交

作者 SHA1 备注 提交日期
Hongzhi (Steve), Chen 346410928f [Misc] Cleanup old flags, and rely on BUILD_TYPE for all features. (#6154) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-08-15 16:31:44 +08:00
Hongzhi (Steve), Chen b9bb640a9a Revert "[Misc] clean up remove --inplace." (#6097) 2023-08-04 11:25:28 +08:00
Hongzhi (Steve), Chen 566719b149 [Misc] clean up remove --inplace. (#6096) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-08-04 09:06:05 +08:00
Hongzhi (Steve), Chen 3397496388 [Misc] Clean up build option for testing. (#6090) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-08-03 17:03:49 +08:00
Songqing Zhang b6f5ba9a80 [Misc] Fix the directory of DGL_DOWNLOAD_DIR (#6048) 2023-07-28 11:33:37 +08:00
Rhett Ying b26da25297 [GraphBolt] remove pydantic_yaml from dependency (#6011) 
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-07-19 10:48:46 +08:00
Hongzhi (Steve), Chen 2746aac3ae [Misc] Use old pydantic yaml version for CI. (#6009) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-07-17 17:40:00 +08:00
Rhett Ying 39890c0c5d [GraphBolt] add pydantic-based metadata for TVT (#5942) 2023-07-04 20:55:26 +08:00
Rhett Ying 1cbe0b275e [CI] skip go tests 2023-07-01 10:40:11 +08:00
Rhett Ying 00972deecf [GraphBolt] convert dgl partition to CSCSamplingGraph (#5736) 2023-05-29 16:49:39 +08:00
peizhou001 494d2b7a07 [GraphBolt] Add graphbolt build into dgl build (#5696) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-25-242.ap-northeast-1.compute.internal>
 2023-05-16 08:58:31 +08:00
Xin Yao acb955e15f [Cleanup] Cleanup unused CMake options (#5470) 
* cleanup unused cmake options

* disable BUILD_TORCH for cugraph

* resolve comments
 2023-03-22 16:06:44 +08:00
Xin Yao 8d5d8962ad [Refactor] Replace third_party/nccl with PyTorch's NCCL backend (#4989) 
* expose GeneratePermutation

* add sparse_all_to_all_push

* add sparse_all_to_all_pull

* add unit test

* handle world_size=1

* remove python nccl wrapper

* remove the nccl dependency

* use pinned memory to speedup D2H copy

* fix lint

* resolve comments

* fix lint

* fix ut

* resolve comments
 2023-03-08 12:59:10 +08:00
Hongzhi (Steve), Chen 325e795a18 Revert "Set USE_LIBXSMM default to OFF. (#5287)" (#5392) 
This reverts commit a5e3139155.
 2023-03-01 16:47:34 +08:00
Hongzhi (Steve), Chen 02f2526b85 [Misc] Fix typo in status.py (#5362) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 22:37:22 +08:00
Hongzhi (Steve), Chen 085b19d7c2 [Misc] Treat aborted as failure in Jenkins. (#5361) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 22:19:26 +08:00
Hongzhi (Steve), Chen e41ce0c66a [Misc] Update Jenkins status. (#5356) 
* test

* blabla

* add

* reformat

* balbla

* rollback

* remove

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 18:45:00 +08:00
Hongzhi (Steve), Chen 71f7e96aeb [Misc] Abort previous CI. (#5346) 
* Abort previous CI

* script

* newtry

* more

* fix

* comment

* add notes

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 15:09:30 +08:00
Hongzhi (Steve), Chen 27b3cd87e2 fix (#5349) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 14:02:25 +08:00
Hongzhi (Steve), Chen b8ed4d9ba3 [Misc] Revert status.py (#5348) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 14:00:08 +08:00
Hongzhi (Steve), Chen e4e0132972 [Misc] Add debug output to avoid silent failure. (#5347) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 13:42:00 +08:00
Hongzhi (Steve), Chen 0127a2ea4d [Misc] Update Jenkins status. (#5345) 
* update

* polish

* polish

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 12:29:00 +08:00
Hongzhi (Steve), Chen e330954ca6 [Misc] Print jenkins response for test. (#5344) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 11:32:29 +08:00
Hongzhi (Steve), Chen deed945625 [Misc] Revert jenkins update change and add build url in log. (#5343) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 11:18:05 +08:00
Hongzhi (Steve), Chen f87e98e4b5 Update Jenkins response status (#5342) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-21 11:06:56 +08:00
Hongzhi (Steve), Chen 86193c26f7 [Misc] Reorg python test (with backend) according to the guideline. (#5312) 
* rename

* remove test transpose

* udpate

* rename

* cleanup

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-17 16:11:39 +08:00
Hongzhi (Steve), Chen d9e550369f [Misc] Reorg python test according to the guideline. (#5307) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-17 16:08:20 +08:00
Hongzhi (Steve), Chen a5e3139155 Set USE_LIBXSMM default to OFF. (#5287) 
* Set USE_LIBXSMM default to OFF.

* update

---------

Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
 2023-02-16 13:08:11 +08:00
Quan (Andy) Gan fb8677b419 [Test] Move example test from unit test to examples (#5290) 
* move example test from unit test to examples

* oops

* oops

* ok
 2023-02-14 16:25:05 +08:00
Quan (Andy) Gan f62669b05c enable sparse on windows and mac (#5277) 
* enable sparse on windows and mac

* that was stupid

* let's see what's going on..

* [Sparse] Fix the import error on Mac OS.

When using template functions that are defined in source files from DGL,
the loader of MacOS somehow cannot find their definitions. This fix simply
avoids depending on template functions from DGL headers.

With this fix, the sparse tests all pass on the MAC environment.

* ok this is the problem

* make errors clearer

* uh

* test

* Update __init__.py

* disabling ddp on windows

---------

Co-authored-by: czkkkkkk <zekucai@gmail.com>
 2023-02-13 13:16:17 +08:00
Rhett Ying 465828cdbc [CI] pre-install required py packages in image for unit/tutorial test (#5276) 2023-02-10 19:11:30 +08:00
Rhett Ying 0c5d6f1b00 [BUILD] enable dgl sparse build in default (#5175) 
* enable dgl sparse build in default

* disable sparse build on cugraph

* update
 2023-01-16 14:01:39 +08:00
peizhou001 56ffb650fe [API Deprecation]Deprecate contrib module (#5114) 2023-01-06 20:16:01 +08:00
Minjie Wang 025e43210f [Sparse] Add tests for sparse examples; Migrate from mock_sparse to mock_sparse2 (#5073) 
* pass gcn

* example tests

* pass gcnii, hgnn, sgc, sign

* black

* test file

* add torchmetrics

* migrate appnp, c_and_s, twirls

* fix style

* minor fix

* fix hypergraphatt and twirls

* pass gat

* fix torchmetric

* lintrunner

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2022-12-29 08:55:25 +08:00
Rhett Ying 9731e02325 [Dist] enable to chunk node/edge data into arbitrary number of chunks (#4930) 
* [Dist] enable to chunk node/edge data into arbitrary number of chunks

* [Dist] enable to split node/edge data into arbitrary parts

* refine code

* Format boolean to uint8 forcely to avoid dist.scatter failure

* convert boolean to int8 before scatter and revert it after scatter

* refine code

* fix test

* refine code

* move test utilities into utils.py

* update comment

* fix empty data

* update

* update

* fix empty data issue

* release unnecessary mem

* release unnecessary mem

* release unnecessary mem

* release unnecessary mem

* release unnecessary mem

* remove unnecessary shuffle data

* separate array_split into standalone utility

* add example

Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
 2022-12-15 10:01:39 +08:00
czkkkkkk 7c059e86c7 [Sparse] Add sparse matrix C++ implementation (#4773) 
* [Sparse] Add sparse matrix C++ implementation

* Add documentation

* Update

* Minor fix

* Move Python code to dgl/mock_sparse2

* Move headers to include

* lint

* Update

* Add dgl_sparse directory

* Move src code to dgl_sparse

* Add __init__.py in tests to avoid naming conflict

* Add dgl sparse so in Jenkinsfile

* Complete docstring & SparseMatrix basic op

* lint

* Disable win tests
 2022-11-07 18:01:19 +08:00
Xin Yao 96297fb8fd [Feature] Add bfloat16 (bf16) support (#4648) 
* add bf16 specializations

* remove SWITCH_BITS

* enable amp for bf16

* remove SWITCH_BITS for cpu kernels

* enbale bf16 based on CUDART

* fix compiling for sm<80

* fix cpu build

* enable unit tests

* update doc

* disable test for CUDA < 11.0

* address comments

* address comments
 2022-11-06 19:48:36 +08:00
Hongzhi (Steve), Chen ea48ce7a37 [Misc] Black auto fix. (#4697) 
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
 2022-10-11 13:31:13 +08:00
Rhett Ying be11409312 [CI] Enable DGL cugaph nightly CI (#4573) 
* [CI] Enable DGL cugaph nightly CI

* fix build issue

* remove runtime
 2022-09-22 15:26:29 +08:00
Xin Yao 880b3b1f97 [Fix] Enable lint check for cuh files and fix compiler warnings (#4585) 
* disable warning for tensorpipe

* fix warning

* enable lint check for cuh files

* resolve comments
 2022-09-21 10:09:14 +08:00
Rhett Ying 7f984b64b2 Revert "[Feature][REVIEW] Enable DGL cugaph nightly CI (#4525)" (#4563) 
This reverts commit ec171c648a.
 2022-09-16 13:57:50 +08:00
Vibhu Jawa ec171c648a [Feature][REVIEW] Enable DGL cugaph nightly CI (#4525) 
* Added cugraph nightly scripts

* Removed nvcr.io//nvidia/pytorch:22.04-py3 reference

Co-authored-by: Rhett Ying <85214957+Rhett-Ying@users.noreply.github.com>
 2022-09-16 11:28:30 +08:00
Rhett Ying 86656a6b34 [CI] use https instead of http (#4488) 2022-08-31 14:59:40 +08:00
Mufei Li 2e8ae9f980 [Dist][CI] Unit test for the new distributed partitioning pipeline (#4394) 
* chunked graph data format

* Update

* Update

* Update task_distributed_test.sh

* Update

* Update

* Revert "Update"

This reverts commit 03c461870f19375fb03125b061fc853ab555577f.

* Update

* Update

* ssh-keygen

* CI

* install openssh

* openssh

* Update

* CI

* Update

* Update

Co-authored-by: Ubuntu <ubuntu@ip-172-31-53-142.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-87.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-20-21.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>
 2022-08-19 14:20:56 +08:00
Rhett Ying 8d3c58202a [CI] upgrade python version to 3.7.0 (#4406) 
* [CI] upgrade python version to 3.7.0

* do not upgrade for mxnet cpu due to seg fault

* fix test failure for mxnet
 2022-08-17 08:02:44 +00:00
Rhett Ying b3242e90b8 [CI] separate distributed tests from torch cpu tests (#4313) 
* [CI] separate distributed tests from torch cpu tests

* remove TF related env
 2022-07-30 16:32:35 +08:00
Rhett Ying 17f1432ab2 [DistTest] fix incorrect shell if statement (#4304) 
* [DistTest] fix incorrect shell if statement

* fix incorrect use of dist.initialize()
 2022-07-28 20:14:47 +08:00
Xin Yao 79b0a50afc [Unittest][Fix] Several unit tests fixes for Ampere+ and PyTorch 1.12+ (#4213) 
* Fix test_csrmm for tensor core

* unset allow tf32 flag

* update test unified tensor

* skip fp16 for CPU
 2022-07-14 19:59:57 +08:00
Chang Liu 885be1784b [Example][Refactor] Refactor GCN example (#4160) 
* Refactor GCN example

* Refactor GCN based on graphsage

* Readme update

* Minor update

* update

* Remove user-defined GCN implementation

* README update

* Update

* Update CONTRIBUTORS.md

* update task_example_test

Co-authored-by: Xin Yao <xiny@nvidia.com>
 2022-07-05 15:58:31 +08:00
Rhett Ying 85f281170f [CI] Add new CI stage for testing cugraph (#4171) 
* [CI] add new stage specific forcuda related features based on nvidia+pytorch

* build and test for gpu_nv

* fix build failure

* fix unit tests

* make -j

* install cython beforehand

* copy cython lib

* test cugraph tests only

* fix typo

* separate test script for cugraph

* refactor build dgl shell
 2022-07-05 10:57:07 +08:00