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515 次代码提交

作者 SHA1 备注 提交日期
peizhou001 ae97049e6c [GraphBolt] Add return_eid for neighbor sampling (#5772) 2023-06-04 10:05:22 +08:00
peizhou001 b32345169b [GraphBolt] Add sample etype neighbors (#5771) 2023-06-03 15:20:23 +08:00
peizhou001 704aa4230f [GraphBolt] Add replace for neighbor sampling (#5770) 
[Graphbolt] Add replace for sampling
 2023-06-02 19:48:27 +08:00
peizhou001 c9c165f7cb [GraphBolt] Add fanout for neighbor sampling (#5768) 
[Graphbolt] Add fanout for sampling
 2023-06-02 18:50:04 +08:00
peizhou001 a99095e78c [GraphBolt]Simple neighbor sampling that picking all neighbors for given nodes (#5765) 
[GraphBolt] Add neighbor sampling picking all neighbors for given nodes
 2023-06-02 16:05:05 +08:00
peizhou001 ee00729bbe [Graphbolt] Define API for Neighbor sampling (#5766) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-25-242.ap-northeast-1.compute.internal>
 2023-06-02 14:17:36 +08:00
Nicola Vitucci a9d6f77012 [Feature] Support heterogeneous graphs in the to_networkx method (#5726) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-06-01 19:49:15 +08:00
czkkkkkk dc8a027903 [Graphbolt] Enable CSCSamplingGraph copy to/load from shared memory and add unittests in Python (#5742) 2023-05-30 19:05:00 +08:00
Rhett Ying 00972deecf [GraphBolt] convert dgl partition to CSCSamplingGraph (#5736) 2023-05-29 16:49:39 +08:00
Rhett Ying 236ffa0f63 [GraphBolt] add in_subgraph() API at the python level (#5743) 2023-05-26 15:37:07 +08:00
Chang Liu 68275b9f3e [Feature] Decompose dataset to each process to add multi-node support for dataloader (#5617) 2023-05-24 16:30:56 -07:00
Rhett Ying 70af8f0d85 [GraphBolt] add support for load/save CSCSamplingGraph in python level (#5733) 2023-05-24 17:24:43 +08:00
peizhou001 567a9df2d0 [GraphBolt] Add csc sampling graph python side code (#5700) 2023-05-23 16:59:59 +08:00
galogm dd768a57f6 [Bugfix] dgl.linkx_homophily calculation fails when all class homophily=0 (#5720) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-05-22 14:34:31 +08:00
peizhou001 ce66280d9d [GraphBolt] Reorganzie graphbolt module (#5711) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-25-242.ap-northeast-1.compute.internal>
 2023-05-19 16:55:03 +08:00
Rhett Ying 0b386a1d4f Merge Graphbolt to master (#5680) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-25-242.ap-northeast-1.compute.internal>
 2023-05-12 12:09:17 +08:00
Kunal Mukherjee 484fabdcc1 [Model] Implemented PGExplainer for Homogeneous graph (#5550) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Infinity_X <Infinity_X@sinomo.net>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-05-10 20:31:48 +08:00
paoxiaode c4c9b830ae [NN] GatedGCNConv (#5654) 2023-05-06 18:20:06 +08:00
Chang Liu e6eefd1a13 [Bugfix] Fix the uninitialized pin_memory flag for empty graph (#5609) 2023-04-26 17:56:01 -07:00
Chang Liu 00c3edc1cf [Bugfix] Fix unit test failures on older GPUs (#5579) 2023-04-21 18:33:51 -07:00
Kunal Mukherjee c0f346e754 [Model] Implemented SubgraphX Explainer for Heterogeneous graph (#5530) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Nick Baker <ndbaker1@outlook.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-04-21 14:05:02 +08:00
czkkkkkk f41934df87 [Sparse] Add conversion between DGLGraph and SparseMatrix. (#5553) 2023-04-20 18:00:34 +08:00
Zhiteng Li b58416f76a [NN] Refine the API of GraphormerLayer (#5565) 
Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-04-19 16:36:25 +08:00
Kunal Mukherjee 95aaa4934a [Fix] np.float and np.int deprecated usage (#5563) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-04-17 18:48:03 +08:00
Kunal Mukherjee 23ef2ddd71 [Fix] np.asscalar deprecated usage (#5557) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-04-17 13:52:25 +08:00
czkkkkkk b57c56d9a1 [Sparse] Support broadcasting operators (#5544) 2023-04-15 10:36:12 +08:00
czkkkkkk 7c465d20fc [Sparse] Support spspdiv (#5541) 
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-04-14 16:46:51 +08:00
rudongyu bb1f8850e5 [NN] Refactor the Code Structure of GT (#5100) 2023-04-14 11:50:14 +08:00
Venzino.Han f1b0a07984 [NN] add egatconv edge_weight (#5539) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-04-13 20:54:42 +08:00
czkkkkkk 893098888e [Sparse] Support spspmul (#5543) 2023-04-13 09:07:49 +08:00
peizhou001 4864a9f903 [Bug] Merge rather replace when find reverse eids (#5532) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-19.ap-northeast-1.compute.internal>
 2023-04-12 10:42:42 +08:00
Chang Liu 62b5f50a5c [Feature] Import PyTorch's pin_memory() method for DGL graph structure (#5366) 2023-04-10 19:21:32 -07:00
Tianqi Zhang (张天启) 27b008b9b1 [BugFix] Fix unstable behavior of beuteforce-sharemem KNN (#5515) 2023-04-10 22:26:10 +08:00
schmidt-ju 97286f98d3 [NN] Add EdgeGAT operator (#5282) 
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
 2023-04-09 22:54:49 +08:00
Ilia Taraban acb4eb7ecd [Feature] Add bfloat16 support for CPU (#5497) 
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-04-06 11:16:41 +02:00
Mufei Li a244de579c [Dataset] WisconsinDataset (#5520) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-04-04 16:44:26 +08:00
Mufei Li dd4c74ff32 [Dataset] CornellDataset and TexasDataset (#5513) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-04-03 16:16:37 +08:00
czkkkkkk 4463b3d6a5 [Sparse] Support strided tensor when calling old DGL APIs (#5506) 2023-03-31 23:18:55 +08:00
Venzino.Han d45eafd47f [NN] add gatconv edge_weight (#5503) 
Co-authored-by: venzino-han <venzino.han@buzzvil.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-03-31 19:53:49 +08:00
Mufei Li 2b5921e759 [Dataset] Actor (#5511) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-31 10:28:50 +08:00
Mufei Li 690f37bbe9 update (#5507) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-28 19:22:44 +08:00
Hongzhi (Steve), Chen 5b409bf7f5 Rename_test (#5487) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-03-24 18:44:24 +08:00
Mufei Li 9e532e7def [Dataset] Chameleon (#5477) 
* update

* update

* update

* lint

* update

* CI

* lint

* update doc

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Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-23 22:34:00 +08:00
ZhenyuLU_Heliodore 4534650f5f [Dataset] Add ZINC Dataset (#5428) 
* Update dgl.data.rst

* Add files via upload

* Add files via upload

* Add files via upload

* Update zinc.py

* Update dgl.data.rst

* Update test_data.py

* Add files via upload

* Update cluster.py

* Update pattern.py

* Update zinc.py

* Update zinc.py

* Update test_data.py

* lint

* fix

* fix path

* update test on label shape

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Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-22 18:04:41 +08:00
czkkkkkk 866c70dace [Sparse] Fix bugs in Diag format conversions (#5465) 2023-03-21 09:24:53 +08:00
Hongzhi (Steve), Chen 8a83027274 [Misc] Merge test utils. (#5440) 
* merge

* format

* rename

* sort

* sort

* update

* update

* update

* Update tests/utils/checks.py

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-03-20 15:32:45 +08:00
Daniil Sizov 87fb7ed05b [Config] Enable libxsmm by default for AVX cpu (#5165) 
* Enable AVX by default

* Fix linting errors

* Fix win64 build (libxsmm not linked)

Libxsmm on Win64 is not linked, should be disabled by default

* Fix clang format issues

* Change lower supported cpu version to LIBXSMM_X86_AVX2

Change lower supported cpu version to LIBXSMM_X86_AVX2 to address https://github.com/dmlc/dgl/issues/3459 issue

* Fix unit test

Remove assumption that libxsmm is enabled in the config by default (only true for intel CPUs with AVX2 instructions)

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-15-137.us-west-2.compute.internal>
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
 2023-03-16 02:05:22 +08:00
czkkkkkk 92e383c3b8 [Sparse] Remove the Python DiagMatrix class (#5444) 
* [Sparse] Remove the Python DiagMatrix class

* Update

* Update

* update

* Update
 2023-03-15 18:17:52 +08:00
Gleb Bazhenov 54b4bd0acd [Data] new functional for creating data splits in graph (#5418) 
* new functional for creating data splits in graph

* minor fix in data split implementation

* apply suggestions from code review

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* refactoring + unit tests

* fix test file name

* move imports to the top

* Revert "fix test file name"

This reverts commit 126323e38c8de6fdc73c826dccc9048aed8f9634.

* remove nccl submodule

* address linter issues

---------

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-03-09 18:55:25 +08:00
Hongzhi (Steve), Chen e250ba3d99 [Misc] Rename test_utils -> pytests_utils. (#5438) 
* rename

* sort

* rename

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-03-09 09:42:29 +08:00