3e5137feaf
[Misc] Autoformat python dgl (Part 2). ( #5332 )
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Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal >
2023-02-20 20:56:25 +08:00
3132da2826
Deprecate ( #4864 )
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rename DGLHeteroGraph to DGLGraph
2022-11-15 10:01:01 +08:00
98325b1097
[Misc] Black auto fix. ( #4691 )
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Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal >
2022-10-10 10:53:51 +08:00
642bdbaf04
[Traversal] Fall back to CPU for Graph Traversal as a Workaround ( #2115 )
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* workaround
* Allow Test for Traversal on GPU Graphs
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal >
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com >
2020-08-29 16:34:31 +08:00
be444e52d9
[Doc/Feature] Refactor, doc update and behavior fix for graphs ( #1983 )
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* Update graph
* Fix for dgl.graph
* from_scipy
* Replace canonical_etypes with relations
* from_networkx
* Update for hetero_from_relations
* Roll back the change of canonical_etypes to relations
* heterograph
* bipartite
* Update doc
* Fix lint
* Fix lint
* Fix test cases
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix test
* Fix
* Update
* Use DGLError
* Update
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* rewrite sanity checks
* delete unnecessary checks
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Update
* Fix
* Update
* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
Co-authored-by: Quan Gan <coin2028@hotmail.com >
2020-08-18 04:26:29 +08:00
42b0c38f81
[Kernel] Migrate traversal on adjlist to CSR ( #1650 )
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* traversal to new framework
* add new
* Fix compile
* Pass test
* keep old version
* lint
* lint
* Fix
* Fix
* Fix compatability with new master
* Fix test and tutorials
* Update according to comments
* Fix test
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-06-19 13:25:18 +08:00
67dc11971f
[Refactor] Use object system for all CAPIs ( #716 )
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* WIP: using object system for graph
* c++ side refactoring done; compiled
* remove stale apis
* fix bug in DGLGraphCreate; passed test_graph.py
* fix bug in python modify; passed utest for pytorch/cpu
* fix lint
* address comments
2019-07-23 12:47:05 -04:00
707334ce85
minor spelling tweaks ( #349 )
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* minor spelling tweaks
* Update CONTRIBUTORS.md
2019-01-10 12:02:31 -05:00
4bd4d6e348
[Lint] Pylint ( #330 )
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* fix lint for graph_index.py
* pylint for base.py
* pylint for batched_graph.py
* pylint for frame.py; simplify and fix bugs in frame when index is slice type
* pylint for graph.py
* pylint for immutable_graph_index.py
* pylint for init.py
* pylint for rest files in root package
* pylint for _ffi package
* pylint for function package
* pylint for runtime package
* pylint for runtime.ir package
* add pylint to ci
* fix mx tests
* fix lint errors
* fix ci
* fix as requested
* fix lint
2019-01-01 15:15:41 -05:00
0d0f44363c
[Bugfix] MX utest traversal memory corruption ( #312 )
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* WIP
* temp fix mx traversal memory crash bug
2018-12-16 21:07:59 -08:00
21255b6528
[Bugfix] tolist and dependencies in dgl.data ( #239 )
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* change Index.tolist -> Index.tonumpy; fix bug in traversal; remove dependencies in data
* fix import
* fix __all__ and some docstring
2018-12-05 12:20:59 -05:00
274e1082f5
[Doc] API doc string for many components ( #245 )
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* builtin function docstring
* init docstring
* view docstring
* add init to index and fix
* node /edge feature
* Example -> Examples
* fix func hyperlink
* traversal
* fix
* from/to_networkx docstring
* minor
* fix duplicate label
* comment about tensor framework
* from scipy sparse matrix
* fix format errors
2018-12-04 17:52:00 -05:00
d6c80e0cf7
[API] bfs with edges ( #132 )
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* bfs with edges
* dfs toy test case
* clean up
* style fix
* bugfix
* updating docs for bfs_edges and readouts
2018-11-11 17:19:55 -05:00
8ea359d125
[API] Message propagation APIs ( #127 )
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* add examples in traversal.py
* message propagate methods
* use the new message propagation for tree-lstm
* update to the new name
* update propagate API doc
* update doc
* add propagate utest
2018-11-09 15:04:57 -05:00
2319167444
[API] Graph traversal ( #103 )
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* bfs, dfs and topological traversal
* dfs and test cases
* Conflicts:
python/dgl/graph.py
src/graph/graph.cc
src/graph/graph_op.cc
* documentation
* requested changes
* Conflicts:
Jenkinsfile
examples/pytorch/gcn/gcn.py
examples/pytorch/gcn/gcn_spmv.py
python/dgl/graph.py
python/dgl/graph_index.py
src/graph/graph.cc
src/graph/graph_op.cc
* Conflicts:
Jenkinsfile
python/dgl/graph_index.py
* fix lint errors
* fix lint errors
* fix lint errors
* fix test cases
* requested changes
* traversal interface
* [Bug] fixed a typo that caused syntax error (#120 )
* WIP
* bfs nodes generator works
* topological traversal
* WIP: dfs_edges
* dfs edges
* dfs labeled edges
* utest for traversal
* fix lint
* fix utest
* code clean
* changes as requested
2018-11-08 10:14:19 -05:00
Hongzhi (Steve), Chen