378c264561
[Model] Fix GCN Normalization ( #249 )
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* WIP
* lr -> 0.01
* new cora dataset
* normalization code
* minor format change
* normalization factor for deg bucket
2018-12-05 12:32:10 -05:00
21255b6528
[Bugfix] tolist and dependencies in dgl.data ( #239 )
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* change Index.tolist -> Index.tonumpy; fix bug in traversal; remove dependencies in data
* fix import
* fix __all__ and some docstring
2018-12-05 12:20:59 -05:00
b1e8d95e99
[Doc] LGNN tutorial ( #210 )
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* tutorial notebook added
* lg tutorial cleaned up
* dataset scaffold
* move dataloader to data
* fix model
* remove todo
* utils seperated
* [model]line graph new implementation + tutorial + binary sub graph dataset
* [tutorial] line graph sphinx scaffold
* [tutorial] lgnn tutorial improved
* [tutorial] remove notebook
* [tutorial] fix lg and gcn links
* [tutorial] fix random seed
* [tutorial]fix
* WIP
* code refactor done
* new mini dataset; remove utils code
* fix
* word fix
* fix link
* minor fix
* minor fix
* minor fix
2018-12-03 17:59:50 -05:00
5278220f85
update s3 links ( #215 )
2018-12-02 20:48:29 +08:00
cccc2339c1
[Dataset] update s3 links ( #209 )
2018-12-01 14:45:30 -05:00
91141a9826
[Dataset] Move file from dropbox to s3 (and fix ci fail due to sst dataset) ( #205 )
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* move file from dropbox to s3
* fix ci and move sst to s3
* remove blank line
2018-11-30 19:44:55 -05:00
c80dc5e012
[model] Tree-LSTM update & hotfix(dropbox link) ( #202 )
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* change the signature of node/edge filter
* upd filter
* Support multi-dimension node feature in SPMV
* stable version
* hotfix
* upd tutorial
* upd README
2018-11-30 19:39:49 -05:00
3a0f86a663
[Doc] data ( #198 )
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* Fix dataset
* Track data APIs
2018-11-30 11:40:22 -05:00
5cda368d79
[Model] SBM hotfix ( #137 )
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* [Model]SBM hotfix
* [Model] remove backend in data
2018-11-27 11:58:03 -05:00
2389df8155
[API] Subgraph sampling API. ( #138 )
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* add neighbor sampler.
* fix sampler.
* handle non-existing nodes differently in MapParentIdToSubgraphId.
* fix sampling tests.
* parallelize sampling.
* add more tests.
* fix a bug in subgraph loader.
* get number of sampled nodes directly.
* load mxnet CSR to DGLGraph directly.
* create graph from mxnet csr array directly.
* use subgraph loader in SSE.
* fix a bug in sampling.
* output framework tensor.
* fix.
* remove unnecessary code.
* fix tests.
* add SSE README.
* move to contrib.
* address comments.
* add tests.
2018-11-14 13:51:27 -08:00
a9ffb59e66
[DOC][Model] Tree-LSTM example and tutorial ( #146 )
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[DOC][Model] Tree-LSTM example and tutorial
2018-11-13 18:09:14 -05:00
6d96a97f17
[Doc] docstring for SST dataset ( #133 )
2018-11-10 11:59:55 -05:00
7241a9c008
[Backend] backend interface ( #109 )
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* backend interface
* small fix
* more comments to the data type dict
* WIP
* convert_to and narrow
* WIP
* pytorch and numpy backend; WIP on mxnet backend
* mxnet backend
* narrow
* Fix all usages
* fix for mx
* fix for mx
* fix mx
* fix mx
* fix mx
* fix mx
* fix mx
* fix mx
* fix mx
* revert jenkins
* add sparse_matrix api
* sparse matrix api
* some fixme
* Fix as requested
2018-11-04 21:42:39 -05:00
b420a5b5b3
[Model] Fix broken CDGNN example ( #111 )
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* pretty printer
* Conflicts:
python/dgl/data/sbm.py
* refined line_graph implementation
* fix broken api calls
* small fix to trigger CI
* requested change
2018-11-05 07:14:01 +08:00
ff92812609
remove pytorch dependency in sbm.py ( #107 )
2018-10-25 20:22:41 -04:00
fb6be9fbd7
[GraphIndex] Create graph index directly from scipy matrix. ( #87 )
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* create synthetic data with scipy.
* changes as comments
2018-10-18 16:39:45 -04:00
6cbdf37c37
Merge branch 'master' into cpp
2018-10-18 15:29:20 -04:00
e7679cf2e6
implement requested changes
2018-10-13 14:24:46 +08:00
0a6d720c30
fix build failure
2018-10-10 12:43:05 +08:00
ec4216dda8
[MODEL] junction tree vae example ( #70 )
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* junction tree vae example
* added README and moved data to dropbox
* auto download; some fix in python3
2018-10-06 16:59:47 -04:00
596ca471a5
Merge branch 'cpp' of https://github.com/jermainewang/dgl into line-graph
2018-10-06 23:52:04 +08:00
c468e06867
some fix
2018-10-05 10:38:44 -04:00
cc372e3774
sbm mixture
2018-10-04 21:22:41 +08:00
882e2a7be0
Graph batching. Support convert nx graph attrs
2018-09-24 21:34:51 -04:00
79f62400fe
WIP: batch graphs
2018-09-21 14:53:25 -04:00
b24daa6607
change to rel import within dgl
2018-09-16 16:14:37 -04:00
61fa3c6cf5
Builtin function and API changes ( #53 )
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* WIP: API renaming
* API rewrite and node function refactor
* builtin functions
* builtin functions tested
* fix test
* send and recv spmv test
* WIP: fix examples
* Fix examples using new APIs
2018-09-01 13:38:01 -04:00
b7eb16595f
Fix 0deg update_to and Tree-LSTM model ( #51 )
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* WIP
* WIP
* treelstm dataloader
* Main training loop.
* trainable treelstm script
* fix dependency
* cuda training
* Add tensorized topological traversal
* allowing update_to() with no incoming messages
* fixing partial cases
2018-08-28 11:57:08 -04:00
0a78dbe12a
Three DGL-GCN implementations ( #35 )
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* synthetic dataset
* some fix
* gcn readme
2018-08-07 15:26:58 -04:00
2c489fadec
SPMV specialization ( #32 )
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* fix edge list order problem in cached graph.
* minor fix
* fix bug in edge iter
* SPMV works
* gcn spmv on CPU
* change gcn style
* fix cached graph performance; fixed gcn dataset bug
* reorg dir
* non-batch spmv; partial update problem with shape change
* fix reorder problem; finish gcn-batch impl
* pop API
* GPU context
2018-08-06 14:00:06 -04:00
Lingfan Yu