mirrors / dmlc--dgl

文件历史

3,215 提交 34 分支 42 Git 标签
fix-gpu-sampling-doc
提交图

483 次代码提交

作者 SHA1 备注 提交日期
Quan (Andy) Gan a17c1bbb6c Merge branch 'master' into fix-gpu-sampling-doc 2023-07-10 15:06:57 +08:00
Nick Baker 70ad508367 [Model] Add Node explanation for Homogenous PGExplainer Impl. (#5839) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-07-10 14:17:39 +08:00
Quan (Andy) Gan cd3cbd3a33 Update minibatch-gpu-sampling.rst 2023-07-01 13:05:30 +08:00
Jiahang Li d381f2263d [Dataset] MovieLens (#5567) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-17-164.ap-northeast-1.compute.internal>
 2023-06-19 16:48:27 +08:00
OlegPlatonov 921476c8c6 [Dataset] Add heterophilous graphs. (#5853) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-06-15 09:14:19 +08:00
Rhett Ying c9778b5522 [DistDGL] remove use of tensorpipe from examples and docs (#5837) 2023-06-09 08:55:53 +08:00
czkkkkkk 44bcb3f8d2 [Doc] Cleanup DiagMatrix related definitions. (#5836) 2023-06-08 19:25:23 +08:00
Nick Baker b0308c8525 [Model] Implemented PGExplainer for Heterogeneous graph (#5739) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Kunal Mukherjee <kunmukh@gmail.com>
 2023-06-07 13:42:36 +08:00
caojy1998 b981126b75 [doc] modify some expression in docs (#5801) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-22-182.ap-northeast-1.compute.internal>
 2023-06-07 12:20:31 +08:00
Hongzhi (Steve), Chen a93e5578d6 [Misc] Remove xbyak (#5752) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-05-30 16:40:20 +08:00
Hongzhi (Steve), Chen 3d179846d5 [Misc] Clean up unused header. (#5716) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-05-23 20:13:02 +08:00
Kunal Mukherjee 484fabdcc1 [Model] Implemented PGExplainer for Homogeneous graph (#5550) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Infinity_X <Infinity_X@sinomo.net>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-05-10 20:31:48 +08:00
paoxiaode c4c9b830ae [NN] GatedGCNConv (#5654) 2023-05-06 18:20:06 +08:00
Mufei Li 4c01563245 [Doc] Update for building from source on Linux (#5658) 2023-05-06 17:32:21 +08:00
Rhett Ying b740c3f0ba [Doc] fix lint configuration path (#5590) 2023-04-23 13:00:45 +08:00
Kunal Mukherjee c0f346e754 [Model] Implemented SubgraphX Explainer for Heterogeneous graph (#5530) 
Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
Co-authored-by: Nick Baker <ndbaker1@outlook.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-04-21 14:05:02 +08:00
czkkkkkk f41934df87 [Sparse] Add conversion between DGLGraph and SparseMatrix. (#5553) 2023-04-20 18:00:34 +08:00
Rhett Ying 6247b0068a [Doc] add how to build Cython extension (#5564) 2023-04-18 09:15:43 +08:00
czkkkkkk b57c56d9a1 [Sparse] Support broadcasting operators (#5544) 2023-04-15 10:36:12 +08:00
rudongyu bb1f8850e5 [NN] Refactor the Code Structure of GT (#5100) 2023-04-14 11:50:14 +08:00
Minjie Wang 7cd6257f96 [Doc] Update script for building doc (#5525) 2023-04-13 11:30:13 +08:00
Hongzhi (Steve), Chen 8c71628ed4 [Misc] Update build from source doc to use the script in linux. (#5537) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-04-13 10:48:35 +08:00
schmidt-ju 97286f98d3 [NN] Add EdgeGAT operator (#5282) 
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
 2023-04-09 22:54:49 +08:00
Mufei Li a244de579c [Dataset] WisconsinDataset (#5520) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-04-04 16:44:26 +08:00
Mufei Li dd4c74ff32 [Dataset] CornellDataset and TexasDataset (#5513) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-04-03 16:16:37 +08:00
Minjie Wang 10c4345648 [Doc] Update doc folder README (#5495) 2023-04-03 15:41:47 +08:00
Mufei Li 2b5921e759 [Dataset] Actor (#5511) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-31 10:28:50 +08:00
Hongzhi (Steve), Chen 3c8ac0934e [Misc] Rename number_of_edges and number_of_nodes to num_edges and num_nodes. (#5490) 
* Other

* revert

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-03-29 11:00:26 +08:00
Mufei Li 690f37bbe9 update (#5507) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-28 19:22:44 +08:00
Mufei Li 9e532e7def [Dataset] Chameleon (#5477) 
* update

* update

* update

* lint

* update

* CI

* lint

* update doc

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-23 22:34:00 +08:00
yangbaechu 097fd6dbb1 fixing typo in Korean User Guide (#5458) 2023-03-23 11:10:55 +08:00
ZhenyuLU_Heliodore 4534650f5f [Dataset] Add ZINC Dataset (#5428) 
* Update dgl.data.rst

* Add files via upload

* Add files via upload

* Add files via upload

* Update zinc.py

* Update dgl.data.rst

* Update test_data.py

* Add files via upload

* Update cluster.py

* Update pattern.py

* Update zinc.py

* Update zinc.py

* Update test_data.py

* lint

* fix

* fix path

* update test on label shape

---------

Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-22 18:04:41 +08:00
Xin Yao acb955e15f [Cleanup] Cleanup unused CMake options (#5470) 
* cleanup unused cmake options

* disable BUILD_TORCH for cugraph

* resolve comments
 2023-03-22 16:06:44 +08:00
yangbaechu 1e792886ed Fix typo (#5455) 2023-03-16 11:01:02 +08:00
Gleb Bazhenov 54b4bd0acd [Data] new functional for creating data splits in graph (#5418) 
* new functional for creating data splits in graph

* minor fix in data split implementation

* apply suggestions from code review

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* refactoring + unit tests

* fix test file name

* move imports to the top

* Revert "fix test file name"

This reverts commit 126323e38c8de6fdc73c826dccc9048aed8f9634.

* remove nccl submodule

* address linter issues

---------

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-03-09 18:55:25 +08:00
Guangyu Zhou 178290249e [Dataset] Add PATTERN dataset (#5422) 
* add PATTERN dataset

* fix bug

* fix bugs

* fix issues

* refine according to dongyu's comments

---------

Co-authored-by: BuptTab <gyzhou2000@gmail.com>
Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-08 14:08:12 +08:00
Quan (Andy) Gan aa6c542aab fix version (#5423) 2023-03-07 13:41:22 +08:00
Tingyu Wang bfd411d0d5 [Model] Add dgl.nn.CuGraphGATConv model (#5168) 
* add CuGraphGATConv model

* lintrunner

* update model to reflect changes in make_mfg_csr(), move max_in_degree to forward()

* simplify pytest markers

* fall back to FG option for large fanout

* update error msg

* add feat_drop and activation options

* add residual option

* Update python/dgl/nn/pytorch/conv/cugraph_gatconv.py

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* Update python/dgl/nn/pytorch/conv/cugraph_gatconv.py

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* reset res_fc

---------

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-03-04 14:10:06 +08:00
Mufei Li f00cd6efbd [Utils] Edge and LINKX homophily measure (#5382) 
* Update

* lint

* lint

* r prefix

* CI

* lint

* skip TF

* Update

* edge homophily

* linkx homophily

* format

* skip TF

* fix test

* update

* lint

* lint

* review

* lint

* update

* lint

* update

* CI

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-03 16:58:20 +08:00
czkkkkkk 34d6475490 [Doc] Fix typos in minibatch-edge.rst (#5308) 2023-03-02 11:26:35 +08:00
Zhiteng Li a53ecd229b [Dataset] Add CLUSTER dataset (#5389) 
* add CLUSTER dataset

* refine according to dongyu's comments

---------

Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-01 16:36:12 +08:00
Mufei Li fcf5ad5f49 [Utils] Node homophily measure (#5376) 
* Update

* lint

* lint

* r prefix

* CI

* lint

* skip TF

* Update

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-02-24 14:26:02 +08:00
Kunal Mukherjee 45153fc078 [Model] Implemented SubgraphX Explainer for Homogeneous graph (#5315) 
* subgraphx commit

* nits

* newline eof added

* lint fix

* test script updated to use default values

* lint fix

* graphs that are used for test cases are updated to a small graph

* lint formatted

* test paramter adj to complete the test under 20s

* lint fixes

---------

Co-authored-by: kxm180046 <kxm180046@utdallas.edu>
 2023-02-23 12:50:31 +08:00
Tingyu Wang bcf9923b32 [Model] Add dgl.nn.CuGraphSAGEConv model (#5137) 
* add CuGraphSAGEConv model

* fix lint issues

* update model to reflect changes in make_mfg_csr(), move max_in_degree to forward()

* lintrunner

* allow reset_parameters()

* remove norm option, simplify test

* allow full graph fallback option, add example

* address comments

* address reviews

---------

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-02-22 13:43:28 +08:00
Hongzhi (Steve), Chen dce899190e [Misc] Auto-reformat multiple python folders. (#5325) 
* auto-reformat

* lintrunner

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-20 10:09:22 +08:00
ZhenyuLU_Heliodore 5598503aa0 [Transform] Add SVDPE Transform Module (#5121) 
* add SVD positional encoding

* modify importing module

* Fixed certain problems

* Change the test unit to a nonsigular one

* Fixed typo and make accord with lintrunner

* added svd_pe into dgl.rst

* Modified dgl.rst
 2023-02-08 12:29:03 +08:00
Minjie Wang 8230640248 Update index.rst (#5233) 2023-01-30 14:15:52 +08:00
Augusto Berndt 94d3c6cb9f [Doc] Fix a typo in dgl.dataloading.rst (#5211) 
changing privimitive to primitive
 2023-01-20 14:23:26 +08:00
Hongzhi (Steve), Chen 17fad103b5 update (#5215) 
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
 2023-01-20 11:25:53 +08:00
Rhett Ying a844d16ec0 [Doc] add sphinxemoji 2023-01-20 10:58:22 +08:00