文件历史

66 次代码提交

作者 SHA1 备注 提交日期
Quan (Andy) Gan fb6af16f83 [BUG] Fix crash during Cython build (#500) 2019-04-17 14:18:22 +08:00
Da Zheng bfdd1eaa44 [Feature] Create shared memory graph store. (#468)
* accelerate gcn_ns.

* add timing.

* run infer with whole graph.

* distributed gcn_ns.

* reconstruct gcn_ns.

* minor fix.

* change graphsage_cv for numa.

* fix #OMP threads.

* accelerate graphsage_cv.

* fix a weird bug.

* add profiler in graphsage_cv.

* accelerate graphsage_cv.

manually aggregate neighbors' embeddings with pull.

* load csr directly in gcn_ns_sc.

* parallel sort for graph index.

* Revert "parallel sort for graph index."

This reverts commit 86fe2c7117fe5e56b0d481b39849c258b166945b.

* run gcn_ns_sc on GPUs.

* acc gcn_cv_sc.

* change gcn_cv for numa.

* fix gcn_cv to use numa and gpu.

* improve graphsage_cv to use numa and gpu.

* improve gcn_ns.

* improve graphsage_cv.

* init shared memory graph store.

* fix.

* enable init ndata.

* improve tests.

* add bidirectional communication.

* link to rt.

* fix compilation error.

* fix shared memory init.

* use MessageQueue for inter-process communication.

* reconstruct immutable graph csr.

* fix gcn.

* load csr to shared memory.

* fix minor bugs.

* add comments.

* refactor SharedMemory.

* fix bugs in ImmutableGraph.

* create CSR graph from shared memory.

* add more test for loading a csr graph.

* terminate graph store properly.

* allow initializing ndata in the graph store server.

* use RPC for inter-process communication.

* a script for loading a graph.

* allow customizing port.

* list all ndata and edata.

* support dtype.

* reorganize SharedMemoryGraphStore.

* fix ndata shape.

* reconstruct gcn_ns.

* print info.

* set omp in gcn_ns.

* reset sampling examples.

* fix lint.

* fix lint.

* reset gcn.

* disable shared memory in windows.

* fix.

* fix.

* reset changes.

* revert nodeflow changes.

* fix cmake.

* fix test.

* fix test.

* fix test.

* fix test.

* add comments.

* fix test.

* move vector out.

* fix lint.

* fix lint.

* move SharedMemory.

* update cmake.

* update comment.

* fix comments.

* Revert "update cmake."

This reverts commit 592445e37077f70a6e3f2e5245f9a3d086b04f3b.

* update cmake.

* add comments.

* rename.

* change the comment.

* fix a bug.

* rename.

* add comments.

* add comments.

* add init_edata.

* rewrite memory alloc.

* move vector to CSR.

* fix.

* init data.

* Revert "init data."

This reverts commit 2b217b9553911b7dd84a9f1d9b68430b5aa18e23.

* init data.

* init new columns correctly.
2019-04-08 12:09:02 -07:00
Minjie Wang cd4f0a2bfc [Release] update version (#440)
* update version

* update news
2019-03-08 11:12:16 -05:00
Minjie Wang ca2a7e1ca1 [Refactor] Nodeflow, sampling, CAPI (#430)
* enable cython

* add helper function and data structure for void_p vector return

* move sampler from graph index to contrib.sampling

* WIP

* WIP

* refactor layer sampling

* pass tests

* fix lint

* fix graphsage

* remove comments

* pickle test

* fix comments

* update dev guide for cython build
2019-03-05 14:07:22 -05:00
brett koonce 707334ce85 minor spelling tweaks (#349)
* minor spelling tweaks

* Update CONTRIBUTORS.md
2019-01-10 12:02:31 -05:00
Minjie Wang 4bd4d6e348 [Lint] Pylint (#330)
* fix lint for graph_index.py

* pylint for base.py

* pylint for batched_graph.py

* pylint for frame.py; simplify and fix bugs in frame when index is slice type

* pylint for graph.py

* pylint for immutable_graph_index.py

* pylint for init.py

* pylint for rest files in root package

* pylint for _ffi package

* pylint for function package

* pylint for runtime package

* pylint for runtime.ir package

* add pylint to ci

* fix mx tests

* fix lint errors

* fix ci

* fix as requested

* fix lint
2019-01-01 15:15:41 -05:00
Minjie Wang af23c45726 [Release] update version (#297)
* update version; add news.md; modify contributing.md

* change urls to dmlc
2018-12-11 15:40:51 -05:00
Gan Quan 37feb479fd [Release] 0.1.2 updates (#276)
* 0.1.2 release

* oops

* more fixes on windows

* [Bugfix] fix download dir (#275)

* fix download dir

* add doc for the env var
2018-12-07 01:54:13 -05:00
Minjie Wang c620bfc2b7 [Doc] faq & env (#263)
* faq & env

* add update version script; 0.0.1 -> 0.1.0
2018-12-05 19:18:33 -05:00
Lingfan Yu a1d50f0f53 [Refactor] Rename before release (#261)
* include/dgl/runtime

* include

* src/runtime

* src/graph

* src/scheduler

* src

* clean up CMakeLists

* further clean up in cmake

* install commands

* python/dgl/_ffi/_cython

* python/dgl/_ffi/_ctypes

* python/dgl/_ffi

* python/dgl

* some fix

* copy right
2018-12-05 16:45:36 -05:00
Minjie Wang 2c2b747808 [Install] pip install (#180)
* add bdist_wheel build

* fix wheel build

* fix setup

* fix ci

* fix setup

* fix

* fix setup

* poke ci

* fix

* poke ci

* clean build

* fix ci

* addback the env
2018-11-27 00:47:01 -05:00
Gan Quan 2ecd2b23ec [Frame] Support slice type indexing; optimize dgl.batch (#110)
* cherry picking optimization from jtnn

* unbatch by slicing frames

* reduce pack

* oops

* support frame read/write with slices

* reverting to unbatch by splitting; slicing is unfriendly to backward

* replacing lru cache with static object factory

* replacing Scheme object with namedtuple

* remove comment

* forgot the find edges interface

* subclassing namedtuple
2018-11-01 00:03:06 -04:00
Minjie Wang 7603b8c351 Fix dlpack bug; zero copy between dgl.ndarray and user tensor enabled 2018-10-09 11:37:59 -04:00
Minjie Wang c086d454d3 Use TVMContext 2018-09-16 16:56:29 -04:00
Minjie Wang 842d37682b python api 2018-09-16 15:49:11 -04:00
Minjie Wang 2694b12725 import ffi solution from TVM 2018-09-05 10:51:31 -04:00