 Israt Nisa
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188152b853
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[Feature] Add Heterograph support on Python for builtin unary msg functions (copy_u, copy_e) (#2989)
* heterograph for binary func
* Added SDDMM support
* Added unittest
* added binary test cases
* unary mfuncs works
* Fixed lint err
* lint check and others
* link check
* fixed import *_hetero issue
* lint check
* replace torch with dgl backend
* lint cehck
* removed torch from test
* skip mxnet unittest
* skip gpu test
* Remove unused/duplicated code
* minor
* changed data structure of ndata and edata
* link check
* reorganized
* minor lint
* minor lint
* raise error for udf func
* lint check
* fix for CUDA 10.1
* add a note for future cross-type max/min reducing
* Add support CUDA < 11
* lint check
* tidied C code
* remove dummy GSDDMM_hetero backward implementation
Co-authored-by: Israt Nisa <nisisrat@amazon.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan Gan <coin2028@hotmail.com>
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2021-07-06 20:41:58 +08:00 |
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Konstantin Sofeikov
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e22087aa36
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[BUG] fix for zero degree nodes (#2786)
* fix for zero degree nodes
* Update python/dgl/ops/spmm.py
linting fix
Co-authored-by: Zihao Ye <zihaoye.cs@gmail.com>
Co-authored-by: Konstantin Sofeikov <konstantin.sofeikov@complyadvantage.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
Co-authored-by: Zihao Ye <zihaoye.cs@gmail.com>
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2021-03-25 22:09:53 +08:00 |
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Minjie Wang
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8a07ab7737
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[Doc] Tutorials re-organization (#2683)
* reorg
* change titles
* rm some stale API doc; minor fix
* fix docs
* add warning
* rm new-tutorial run in ci
* lint
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2021-02-20 17:42:45 +08:00 |
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Mufei Li
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3ca52b1e59
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[Fix] Various Fix after Bug Bash (#2620)
* update
* Misc fix
* Update
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2021-02-05 17:34:16 +08:00 |
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Quan (Andy) Gan
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3a19bbc508
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fix doc (#2604)
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2021-02-02 11:04:43 +08:00 |
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Zihao Ye
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6b02babbad
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[doc] Add docstring for segment reduce. (#2375)
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2020-11-27 18:04:13 +08:00 |
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Zihao Ye
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3adbfa1812
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[Performance] Use segment operators for graph readout. (#2361)
* upd
* upd
* update
* upd
* upd
* upd
* fix
* lint
* lint
* pylint
* doc
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2020-11-23 01:45:33 +08:00 |
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Mingjian Wen
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25a8e3f181
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Fix segment_reduce() ignoring tailing 0 segments (#2228)
Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
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2020-09-24 15:07:45 +08:00 |
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Zihao Ye
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45b610c49a
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fix edge_softmax (#2160)
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
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2020-09-09 14:19:43 +08:00 |
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Mufei Li
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be444e52d9
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[Doc/Feature] Refactor, doc update and behavior fix for graphs (#1983)
* Update graph
* Fix for dgl.graph
* from_scipy
* Replace canonical_etypes with relations
* from_networkx
* Update for hetero_from_relations
* Roll back the change of canonical_etypes to relations
* heterograph
* bipartite
* Update doc
* Fix lint
* Fix lint
* Fix test cases
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix test
* Fix
* Update
* Use DGLError
* Update
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* rewrite sanity checks
* delete unnecessary checks
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Update
* Fix
* Update
* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan Gan <coin2028@hotmail.com>
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2020-08-18 04:26:29 +08:00 |
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Zihao Ye
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2fc280ba65
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only filling zeros for min/max reducer (#2026)
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2020-08-15 12:43:36 +08:00 |
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Quan (Andy) Gan
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63e2ba23c6
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[WIP][Kernel] Set the built-in reduce result of zero-degree nodes to 0 in C (#2017)
* test idea
* cuda kernels
* lint and fixes
* lint
* change to another strategy
* use infinity
* fix
Co-authored-by: Zihao Ye <expye@outlook.com>
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2020-08-14 22:59:24 +08:00 |
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zhjwy9343
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2fa7f71ad5
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[Doc] new nn api doc (#2019)
* Add dotproduct attention
* [Feature] Add dotproduct attention
* [Feature] Add dotproduct attention
* [Feature] Add dotproduct attention
* [New] Update landing page
* [New] Update landing page
* [New] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Doc] Update landing page
* [Improvement] use dgl build-in in dotgatconv
* [Doc] review API doc string bottom up
* [Doc] Add doc of input and output features
* [Doc] Update doc string for pooling and transformer.
* [Doc] Reformat doc string and change some wordings.
* [Doc] Doc string refactoring.
* [Doc] Doc string refactoring.
* [Doc] Doc string refactoring.
* [Doc] Doc string refactoring.
* [Doc] Doc string refactoring.
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
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2020-08-14 18:00:38 +08:00 |
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Zihao Ye
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6294677f8a
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[hotfix] Set reduce results to all zero for nodes with zero in-degrees. (#2011)
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2020-08-13 01:20:56 +08:00 |
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Zihao Ye
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0f56575938
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[feature] Allow copy_e + udf reduce function (#1996)
* up
* pylint
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2020-08-11 18:47:40 +08:00 |
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Zihao Ye
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18bfec24cf
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[hotfix] Refactor edge softmax module (#1967)
* upd
* upd
* upd
* upd
* upd
* upd
* upd
* upd
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2020-08-07 23:50:12 +08:00 |
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Minjie Wang
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22167f7203
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[Refactor] Enable new kernel in all message passing APIs (#1953)
* WIP: frame refactor
* new frame
* simple update_all builtin
* move all subgraph routines into the same file
* sddmm & spmm schedule; node & edge udf
* degree bucketing
* some tricky 0deg corner cases
* bug in frame append
* merge test_hetero_basics and test_basics
* some code rearange
* fix test_heterograph
* add mean spmm
* enable all builtin combinations
* pass gpu test
* pass pytorch tests
* wip
* fix some pt debugging codes
* fix bug in mxnet backward
* pass all mxnet utests
* passed tf tests
* docstring
* lint
* lint
* fix broadcasting bugs
* add warning and clamp for mean reducer
* add test for zero-degree mean
* address comments
* lint
* small fix
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2020-08-07 15:40:25 +08:00 |
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Zihao Ye
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a28bfa9f5f
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[hotfix] Activate kernel unittest for tensorflow (#1895)
* upd
* upd
* upd
* upd
* upd
* trigger
* simplify unittest
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
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2020-07-31 19:57:53 +08:00 |
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Minjie Wang
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444becf00a
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[Misc] Move many deprecated codes to the deprecate folder (#1893)
* some file movements
* move some codes to deprecated
* more deprecation
* lint
* remove useless test
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2020-07-30 18:17:33 +08:00 |
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Zihao Ye
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05a4337901
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[Doc] Introduce the relation of message passing APIs and operators in docstring. (#1878)
* upd
* fix typo
* upd
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2020-07-29 00:41:47 +08:00 |
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Zihao Ye
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2fa2b4534e
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[Feature] Support higher order derivative for message passing. (#1877)
* upd
* fix typo
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2020-07-28 23:11:06 +08:00 |
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Zihao Ye
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2b8eb5be6f
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[refactor] Move spmm and sddmm operators to operator module (#1873)
* upd
* upd
* upd
* upd
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2020-07-28 18:39:12 +08:00 |
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