 xiang song(charlie.song)
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4edde000a4
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Fix tree lstm (#2052)
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
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2020-08-19 10:44:10 +08:00 |
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Xiangkun Hu
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b35388020d
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[Bugfix] fix vocab not saved bug in SSTDataset (#2036)
* PPIDataset
* Revert "PPIDataset"
This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.
* Update tree.py
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2020-08-17 21:59:14 +08:00 |
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Tong He
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967ecb8064
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[Dataset] Fix the docstring format for dgl.data section (#1941)
* PPIDataset
* Revert "PPIDataset"
This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.
* update data rst
* update data doc and docstring
* API doc rst for dataset
* docstring
* update api doc
* add url format
* update docstring
* update citation graph
* update knowledge graph
* update gc datasets
* fix index
* Rst fix (#3)
* Fix syntax
* syntax
* update docstring
* update doc (#4)
* final update
* fix rdflib
* fix rdf
Co-authored-by: HuXiangkun <huxk_hit@qq.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
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2020-08-06 14:47:49 +08:00 |
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Xiangkun Hu
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001d793711
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[Dataset] SSTDataset (#1918)
* PPIDataset
* Revert "PPIDataset"
This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.
* SSTDataset
* Update tree.py
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2020-08-03 19:15:28 +08:00 |
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Minjie Wang
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44089c8b4d
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[Refactor][Graph] Merge DGLGraph and DGLHeteroGraph (#1862)
* Merge
* [Graph][CUDA] Graph on GPU and many refactoring (#1791)
* change edge_ids behavior and C++ impl
* fix unittests; remove utils.Index in edge_id
* pass mx and th tests
* pass tf test
* add aten::Scatter_
* Add nonzero; impl CSRGetDataAndIndices/CSRSliceMatrix
* CSRGetData and CSRGetDataAndIndices passed tests
* CSRSliceMatrix basic tests
* fix bug in empty slice
* CUDA CSRHasDuplicate
* has_node; has_edge_between
* predecessors, successors
* deprecate send/recv; fix send_and_recv
* deprecate send/recv; fix send_and_recv
* in_edges; out_edges; all_edges; apply_edges
* in deg/out deg
* subgraph/edge_subgraph
* adj
* in_subgraph/out_subgraph
* sample neighbors
* set/get_n/e_repr
* wip: working on refactoring all idtypes
* pass ndata/edata tests on gpu
* fix
* stash
* workaround nonzero issue
* stash
* nx conversion
* test_hetero_basics except update routines
* test_update_routines
* test_hetero_basics for pytorch
* more fixes
* WIP: flatten graph
* wip: flatten
* test_flatten
* test_to_device
* fix bug in to_homo
* fix bug in CSRSliceMatrix
* pass subgraph test
* fix send_and_recv
* fix filter
* test_heterograph
* passed all pytorch tests
* fix mx unittest
* fix pytorch test_nn
* fix all unittests for PyTorch
* passed all mxnet tests
* lint
* fix tf nn test
* pass all tf tests
* lint
* lint
* change deprecation
* try fix compile
* lint
* update METIDS
* fix utest
* fix
* fix utests
* try debug
* revert
* small fix
* fix utests
* upd
* upd
* upd
* fix
* upd
* upd
* upd
* upd
* upd
* trigger
* +1s
* [kernel] Use heterograph index instead of unitgraph index (#1813)
* upd
* upd
* upd
* fix
* upd
* upd
* upd
* upd
* upd
* trigger
* +1s
* [Graph] Mutation for Heterograph (#1818)
* mutation add_nodes and add_edges
* Add support for remove_edges, remove_nodes, add_selfloop, remove_selfloop
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
* upd
* upd
* upd
* fix
* [Transfom] Mutable transform (#1833)
* add nodesy
* All three
* Fix
* lint
* Add some test case
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* fix
* triger
* Fix
* fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
* [Graph] Migrate Batch & Readout module to heterograph (#1836)
* dgl.batch
* unbatch
* fix to device
* reduce readout; segment reduce
* change batch_num_nodes|edges to function
* reduce readout/ softmax
* broadcast
* topk
* fix
* fix tf and mx
* fix some ci
* fix batch but unbatch differently
* new checkk
* upd
* upd
* upd
* idtype behavior; code reorg
* idtype behavior; code reorg
* wip: test_basics
* pass test_basics
* WIP: from nx/ to nx
* missing files
* upd
* pass test_basics:test_nx_conversion
* Fix test
* Fix inplace update
* WIP: fixing tests
* upd
* pass test_transform cpu
* pass gpu test_transform
* pass test_batched_graph
* GPU graph auto cast to int32
* missing file
* stash
* WIP: rgcn-hetero
* Fix two datasety
* upd
* weird
* Fix capsuley
* fuck you
* fuck matthias
* Fix dgmg
* fix bug in block degrees; pass rgcn-hetero
* rgcn
* gat and diffpool fix
also fix ppi and tu dataset
* Tree LSTM
* pointcloud
* rrn; wip: sgc
* resolve conflicts
* upd
* sgc and reddit dataset
* upd
* Fix deepwalk, gindt and gcn
* fix datasets and sign
* optimization
* optimization
* upd
* upd
* Fix GIN
* fix bug in add_nodes add_edges; tagcn
* adaptive sampling and gcmc
* upd
* upd
* fix geometric
* fix
* metapath2vec
* fix agnn
* fix pickling problem of block
* fix utests
* miss file
* linegraph
* upd
* upd
* upd
* graphsage
* stgcn_wave
* fix hgt
* on unittests
* Fix transformer
* Fix HAN
* passed pytorch unittests
* lint
* fix
* Fix cluster gcn
* cluster-gcn is ready
* on fixing block related codes
* 2nd order derivative
* Revert "2nd order derivative"
This reverts commit 523bf6c249bee61b51b1ad1babf42aad4167f206.
* passed torch utests again
* fix all mxnet unittests
* delete some useless tests
* pass all tf cpu tests
* disable
* disable distributed unittest
* fix
* fix
* lint
* fix
* fix
* fix script
* fix tutorial
* fix apply edges bug
* fix 2 basics
* fix tutorial
Co-authored-by: yzh119 <expye@outlook.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-7-42.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal>
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2020-07-28 14:30:41 +08:00 |
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Quan (Andy) Gan
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2b9d06b6e2
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[Data] Retry downloading once if dataset initialization fails (#1520)
* dataloader guard
* more fixes
* sets overwrite to true by default
* Update utils.py
* fix
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
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2020-06-03 17:21:05 +08:00 |
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Da Zheng
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a0721405cf
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[BUGFIX] don’t import dgl in the package. (#1382)
* fix dgl data.
* remove more.
* fix.
* fix.
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-150.us-west-2.compute.internal>
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2020-03-22 01:29:16 -07:00 |
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Quan (Andy) Gan
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1c4bfb62bb
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[Performance] Replace np.array with np.asarray (#1301)
* replace np.array with np.asarray
* fix
Co-authored-by: Minjie Wang <minjie.wang@nyu.edu>
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2020-03-03 20:45:41 +08:00 |
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Da Zheng
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1bbc885b40
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move batcher to examples. (#269)
* move pytorch code to examples.
* fix.
* fix tutorial
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2018-12-06 06:45:27 -08:00 |
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Minjie Wang
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21255b6528
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[Bugfix] tolist and dependencies in dgl.data (#239)
* change Index.tolist -> Index.tonumpy; fix bug in traversal; remove dependencies in data
* fix import
* fix __all__ and some docstring
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2018-12-05 12:20:59 -05:00 |
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Haibin Lin
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5278220f85
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update s3 links (#215)
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2018-12-02 20:48:29 +08:00 |
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Haibin Lin
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cccc2339c1
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[Dataset] update s3 links (#209)
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2018-12-01 14:45:30 -05:00 |
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VoVAllen
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91141a9826
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[Dataset] Move file from dropbox to s3 (and fix ci fail due to sst dataset) (#205)
* move file from dropbox to s3
* fix ci and move sst to s3
* remove blank line
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2018-11-30 19:44:55 -05:00 |
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Zihao Ye
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c80dc5e012
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[model] Tree-LSTM update & hotfix(dropbox link) (#202)
* change the signature of node/edge filter
* upd filter
* Support multi-dimension node feature in SPMV
* stable version
* hotfix
* upd tutorial
* upd README
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2018-11-30 19:39:49 -05:00 |
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Mufei Li
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3a0f86a663
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[Doc] data (#198)
* Fix dataset
* Track data APIs
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2018-11-30 11:40:22 -05:00 |
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Zihao Ye
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a9ffb59e66
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[DOC][Model] Tree-LSTM example and tutorial (#146)
[DOC][Model] Tree-LSTM example and tutorial
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2018-11-13 18:09:14 -05:00 |
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Minjie Wang
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6d96a97f17
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[Doc] docstring for SST dataset (#133)
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2018-11-10 11:59:55 -05:00 |
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Minjie Wang
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c468e06867
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some fix
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2018-10-05 10:38:44 -04:00 |
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Minjie Wang
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882e2a7be0
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Graph batching. Support convert nx graph attrs
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2018-09-24 21:34:51 -04:00 |
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Minjie Wang
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79f62400fe
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WIP: batch graphs
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2018-09-21 14:53:25 -04:00 |
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Minjie Wang
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b24daa6607
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change to rel import within dgl
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2018-09-16 16:14:37 -04:00 |
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Gan Quan
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b7eb16595f
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Fix 0deg update_to and Tree-LSTM model (#51)
* WIP
* WIP
* treelstm dataloader
* Main training loop.
* trainable treelstm script
* fix dependency
* cuda training
* Add tensorized topological traversal
* allowing update_to() with no incoming messages
* fixing partial cases
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2018-08-28 11:57:08 -04:00 |
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