Tomohiro Endo
cb2327d4a9
[Example] Fix error in gcn train due to missing argument ( #3040 )
...
* Fix example
* Remove register_data_args and revert to dataset
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2021-06-23 15:50:07 +08:00
Mufei Li
b1840f49fa
[Dataset] Change the Data Type of the Node Features in GINDataset/TUDataset from Float64 to Float32 ( #2592 )
...
* Update
* Update
* Update
* update
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
Co-authored-by: Tong He <hetong007@gmail.com >
2021-02-03 21:00:45 +08:00
Mufei Li
2b77ad41e1
[Example] Fix GCMC ( #2067 )
...
* Fix
* Update data.py
* Update README.md
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal >
2020-08-19 20:58:57 +08:00
xiang song(charlie.song)
4c5136c8f8
deprecated some mxnet example ( #2054 )
...
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-08-19 15:50:57 +08:00
xiang song(charlie.song)
4edde000a4
Fix tree lstm ( #2052 )
...
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal >
2020-08-19 10:44:10 +08:00
xiang song(charlie.song)
f3f35098e6
Fix ( #2051 )
...
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal >
2020-08-19 08:45:29 +08:00
xiang song(charlie.song)
3d65484323
Fix mxnet gin ( #2048 )
...
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-08-19 00:05:15 +08:00
Mufei Li
9088c63592
[Feature] Change the Default Value of transpose in DGLGraph.adj ( #2046 )
...
* Update adj
* Fix
2020-08-18 22:45:46 +08:00
xiang song(charlie.song)
09ec6020ac
[Example] rm gcn spmv ( #2044 )
...
* rm gcn spmv
* remove useless test
* remove useless test
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-08-18 17:48:38 +08:00
xiang song(charlie.song)
1a1f38e3fe
remove kvstore example which is not maintianed and is out of date ( #2041 )
...
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-08-18 15:09:21 +08:00
Mufei Li
be444e52d9
[Doc/Feature] Refactor, doc update and behavior fix for graphs ( #1983 )
...
* Update graph
* Fix for dgl.graph
* from_scipy
* Replace canonical_etypes with relations
* from_networkx
* Update for hetero_from_relations
* Roll back the change of canonical_etypes to relations
* heterograph
* bipartite
* Update doc
* Fix lint
* Fix lint
* Fix test cases
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix test
* Fix
* Update
* Use DGLError
* Update
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* rewrite sanity checks
* delete unnecessary checks
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Update
* Fix
* Update
* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
Co-authored-by: Quan Gan <coin2028@hotmail.com >
2020-08-18 04:26:29 +08:00
Zihao Ye
264d96cdf5
[bugfix] Fix a bunch of examples to be compatible with dgl 0.5 ( #1957 )
...
* upd
* upd
* upd
* upd
* upd
* upd
* fix pinsage also
* upd
* upd
* upd
Co-authored-by: Ubuntu <ubuntu@ip-172-31-29-3.us-east-2.compute.internal >
Co-authored-by: Quan Gan <coin2028@hotmail.com >
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
2020-08-08 01:31:23 +08:00
Xiangkun Hu
001d793711
[Dataset] SSTDataset ( #1918 )
...
* PPIDataset
* Revert "PPIDataset"
This reverts commit 264bd0c960cfa698a7bb946dad132bf52c2d0c8a.
* SSTDataset
* Update tree.py
2020-08-03 19:15:28 +08:00
xiang song(charlie.song)
b347590a37
[Dataset] Citation graph ( #1902 )
...
* citation graph
* GCN example use new citatoin dataset
* mxnet gat
* triger
* Fix
* Fix gat
* fix
* Fix tensorflow dgi
* Fix appnp, graphsage for mxnet
* fix monet and sgc for mxnet
* Fix tagcn
* update sgc, appnp
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-08-01 19:25:50 +08:00
xiang song(charlie.song)
aee1067941
[Dataset] RDF dataset with DGL-Dataset template ( #1869 )
...
* update rdf builtin dataset
* Fix
* use new dataset
* fix
* rdf dataset using new framework
* tf work
* Fix mxnet
* Fix tensorflow
* Fix mxnet
* Update
* upd
* update some docstring
* clean some dead code
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
2020-07-30 09:12:00 +08:00
xiang song(charlie.song)
15411d932c
[Example] Fix some example after graph refactor. ( #1884 )
...
* Update cluster GCN README
We do not need to build metis right now.
We can use builtin metis.
* Fix gcmc mxnet
* Fix graphwriter
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal >
2020-07-29 22:07:47 +08:00
Minjie Wang
44089c8b4d
[Refactor][Graph] Merge DGLGraph and DGLHeteroGraph ( #1862 )
...
* Merge
* [Graph][CUDA] Graph on GPU and many refactoring (#1791 )
* change edge_ids behavior and C++ impl
* fix unittests; remove utils.Index in edge_id
* pass mx and th tests
* pass tf test
* add aten::Scatter_
* Add nonzero; impl CSRGetDataAndIndices/CSRSliceMatrix
* CSRGetData and CSRGetDataAndIndices passed tests
* CSRSliceMatrix basic tests
* fix bug in empty slice
* CUDA CSRHasDuplicate
* has_node; has_edge_between
* predecessors, successors
* deprecate send/recv; fix send_and_recv
* deprecate send/recv; fix send_and_recv
* in_edges; out_edges; all_edges; apply_edges
* in deg/out deg
* subgraph/edge_subgraph
* adj
* in_subgraph/out_subgraph
* sample neighbors
* set/get_n/e_repr
* wip: working on refactoring all idtypes
* pass ndata/edata tests on gpu
* fix
* stash
* workaround nonzero issue
* stash
* nx conversion
* test_hetero_basics except update routines
* test_update_routines
* test_hetero_basics for pytorch
* more fixes
* WIP: flatten graph
* wip: flatten
* test_flatten
* test_to_device
* fix bug in to_homo
* fix bug in CSRSliceMatrix
* pass subgraph test
* fix send_and_recv
* fix filter
* test_heterograph
* passed all pytorch tests
* fix mx unittest
* fix pytorch test_nn
* fix all unittests for PyTorch
* passed all mxnet tests
* lint
* fix tf nn test
* pass all tf tests
* lint
* lint
* change deprecation
* try fix compile
* lint
* update METIDS
* fix utest
* fix
* fix utests
* try debug
* revert
* small fix
* fix utests
* upd
* upd
* upd
* fix
* upd
* upd
* upd
* upd
* upd
* trigger
* +1s
* [kernel] Use heterograph index instead of unitgraph index (#1813 )
* upd
* upd
* upd
* fix
* upd
* upd
* upd
* upd
* upd
* trigger
* +1s
* [Graph] Mutation for Heterograph (#1818 )
* mutation add_nodes and add_edges
* Add support for remove_edges, remove_nodes, add_selfloop, remove_selfloop
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
* upd
* upd
* upd
* fix
* [Transfom] Mutable transform (#1833 )
* add nodesy
* All three
* Fix
* lint
* Add some test case
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* fix
* triger
* Fix
* fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
* [Graph] Migrate Batch & Readout module to heterograph (#1836 )
* dgl.batch
* unbatch
* fix to device
* reduce readout; segment reduce
* change batch_num_nodes|edges to function
* reduce readout/ softmax
* broadcast
* topk
* fix
* fix tf and mx
* fix some ci
* fix batch but unbatch differently
* new checkk
* upd
* upd
* upd
* idtype behavior; code reorg
* idtype behavior; code reorg
* wip: test_basics
* pass test_basics
* WIP: from nx/ to nx
* missing files
* upd
* pass test_basics:test_nx_conversion
* Fix test
* Fix inplace update
* WIP: fixing tests
* upd
* pass test_transform cpu
* pass gpu test_transform
* pass test_batched_graph
* GPU graph auto cast to int32
* missing file
* stash
* WIP: rgcn-hetero
* Fix two datasety
* upd
* weird
* Fix capsuley
* fuck you
* fuck matthias
* Fix dgmg
* fix bug in block degrees; pass rgcn-hetero
* rgcn
* gat and diffpool fix
also fix ppi and tu dataset
* Tree LSTM
* pointcloud
* rrn; wip: sgc
* resolve conflicts
* upd
* sgc and reddit dataset
* upd
* Fix deepwalk, gindt and gcn
* fix datasets and sign
* optimization
* optimization
* upd
* upd
* Fix GIN
* fix bug in add_nodes add_edges; tagcn
* adaptive sampling and gcmc
* upd
* upd
* fix geometric
* fix
* metapath2vec
* fix agnn
* fix pickling problem of block
* fix utests
* miss file
* linegraph
* upd
* upd
* upd
* graphsage
* stgcn_wave
* fix hgt
* on unittests
* Fix transformer
* Fix HAN
* passed pytorch unittests
* lint
* fix
* Fix cluster gcn
* cluster-gcn is ready
* on fixing block related codes
* 2nd order derivative
* Revert "2nd order derivative"
This reverts commit 523bf6c249bee61b51b1ad1babf42aad4167f206.
* passed torch utests again
* fix all mxnet unittests
* delete some useless tests
* pass all tf cpu tests
* disable
* disable distributed unittest
* fix
* fix
* lint
* fix
* fix
* fix script
* fix tutorial
* fix apply edges bug
* fix 2 basics
* fix tutorial
Co-authored-by: yzh119 <expye@outlook.com >
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-7-42.us-west-2.compute.internal >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal >
Co-authored-by: Ubuntu <ubuntu@ip-172-31-68-185.ec2.internal >
2020-07-28 14:30:41 +08:00
Da Zheng
7c47d8c9b4
[Feature] Simplify shared memory graph index ( #1381 )
...
* simplify shared memory graph index.
* fix.
* remove edge_dir in SharedMemGraphStore.
* avoid creating shared-mem graph store with from_csr.
* simplify from_csr.
* add comments.
* fix lint.
* remove the test.
* fix compilation error.
* fix a bug.
* fix a bug.
Co-authored-by: Ubuntu <ubuntu@ip-172-31-16-150.us-west-2.compute.internal >
2020-04-05 15:33:47 -07:00
xiang song(charlie.song)
67cb7a43a0
[Feature] Deprecate multigraph ( #1389 )
...
* Deprecate multi-graph
* Handle heterograph and edge_ids
* lint
* Fix
* Remove multigraph in C++ end
* Fix lint
* Add some test and fix something
* Fix
* Fix
* upd
* Fix some test case
* Fix
* Fix
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal >
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-03-28 21:31:24 +08:00
Mufei Li
0f40c6e49c
[Hetero] Replace card with num_nodes
...
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
2020-03-20 16:56:53 +08:00
Tong He
cbee427839
[Model] Scene Graph Extraction Model with GluonCV ( #1260 )
...
* add working scripts
* add frcnn training script
* remove redundent files
* refactor validation computation, will optimize sgdet and training
* validation finally finished
* f-rcnn training
* test reldn
* rm file
* update reldn training
* data preprocess to h5
* temp
* use coco json
* fix conflict
* new obj dataset for detection
* update training
* before cleanup
* remove abundant files
* add arg parse to train
* cleanup code file
* update
* fix
* add readme
* add ipynb as demo
* add demo pic
* update readme
* add demo script
* improve paths
* improve readme
* add docstrings
* fix args description
* update readme
* add models from s3
* update README
Co-authored-by: Minjie Wang <minjie.wang@nyu.edu >
2020-03-05 11:54:26 +08:00
Chao Ma
ddf8c858e1
[KVStore] Small fix on kvstore ( #1284 )
...
* update
* str to int
* update
* update
* update
* test remove sync
* update
* update
* update
* update
* update
* update
* update
* update
* clear
2020-02-23 15:43:34 +08:00
Chao Ma
b133abb82e
[KVStore] New kvstore used by DGL-KE ( #1263 )
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* new kvstore
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* test warning
* update
* update
* udpate
* update
* update
* update
* update
* small fix
* small fix
* get group count
* update
* update
* make file
* update
* use addr
* get id
* partition book
* update
* partition
* barrier
* update
* loop count
* update
* update
* update
* update
* update
* update
* update
* update
* update
* add mxnet demo
* update ip
* update
* update
* update
* random
* update
* update
* update
* update
* update
* update
* fix lint
* fix lint
* fix lint
2020-02-17 13:39:13 +08:00
Zihao Ye
7a80faf120
[Bugfix] Correct the loss function in RGCN model ( #1217 )
...
* upd
* upd
* fix
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com >
2020-02-13 18:35:07 +08:00
Chao Ma
6731ea3af7
[KVStore] Reduce memory cost of kvstore ( #1156 )
...
* API change of kvstore
* add demo for kvstore
* update
* remove duplicated log
* change queue size
* update
* update
* update
* update
* update
* update
* update
* update
* update
* fix lint
* change name
* update
* fix lint
* update
* update
* update
* update
* change message queue size to a python argument
* change default queue size to 2GB
* OMP_NUM_THREADS=1
* add multiple NICs support for kvstore
* test
* fix lint
* update
* update
* update
* update
* update
* update
* update
* fix lint
* fix lint
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* update
* fix lint
2019-12-30 20:25:32 +08:00
Chao Ma
4f02bb751b
[KVStore] Made kvstore can support multiple NICs ( #1150 )
...
* API change of kvstore
* add demo for kvstore
* update
* remove duplicated log
* change queue size
* update
* update
* update
* update
* update
* update
* update
* update
* update
* fix lint
* change name
* update
* fix lint
* update
* update
* update
* update
* change message queue size to a python argument
* change default queue size to 2GB
* OMP_NUM_THREADS=1
* add multiple NICs support for kvstore
* test
* fix lint
* update
* update
* update
* update
* update
* update
* update
* fix lint
* fix lint
* update
* update
* update
* update
2019-12-30 15:17:31 +08:00
Chao Ma
d57ff78da1
[Small Fix] Change default message queue size of communicator to 2GB ( #1140 )
...
* API change of kvstore
* add demo for kvstore
* update
* remove duplicated log
* change queue size
* update
* update
* update
* update
* update
* update
* update
* update
* update
* fix lint
* change name
* update
* fix lint
* update
* update
* update
* update
* change message queue size to a python argument
* change default queue size to 2GB
* OMP_NUM_THREADS=1
2019-12-25 17:03:52 +08:00
Chao Ma
e4ef8d1a80
[KVStore] API change of kvstore ( #1058 )
...
* API change of kvstore
* add demo for kvstore
* update
* remove duplicated log
* change queue size
* update
* update
* update
* update
* update
* update
* update
* update
* update
* fix lint
* change name
* update
* fix lint
* update
* update
* update
* update
* change message queue size to a python argument
2019-12-24 17:05:15 +08:00
Zihao Ye
fdc58a8996
[Hotfix] Fix GAT example and clarify the usage of early stop ( #1065 )
...
* upd
* rm redundancy:
* upd
2019-11-30 23:43:15 +08:00
Chao Ma
a0193fd539
Small change for kvstore api ( #981 )
...
* Small change for kvstore api
* fix ci
* fix ci
2019-11-08 16:25:12 +08:00
Chao Ma
7897fa3b9c
add init api on kvserver ( #975 )
2019-11-05 16:21:35 +08:00
Chao Ma
cccde032f4
[kvstore] Performance improvement for distributed kvstore ( #972 )
...
* Performance improvment for distributed kvstore
* update
* update
2019-11-04 18:27:00 +08:00
Zihao Ye
fdd0fe651d
hotfix ( #971 )
2019-11-04 12:11:53 +08:00
Zihao Ye
9a0511c8e9
[NN] nn modules & examples update ( #890 )
...
* upd
* damn it
* fuck
* fuck pylint
* fudge
* remove some comments about MXNet
* upd
* upd
* damn it
* damn it
* fuck
* fuck
* upd
* upd
* pylint bastard
* upd
* upd
* upd
* upd
* upd
* upd
* upd
* upd
* upd
2019-11-03 17:29:42 -05:00
xiang song(charlie.song)
82499e602b
[Bug Fix] Fix package reliability bug of networkx ( #949 )
...
* upd
* fig edgebatch edges
* add test
* trigger
* Update README.md for pytorch PinSage example.
Add noting that the PinSage model example under
example/pytorch/recommendation only work with Python 3.6+
as its dataset loader depends on stanfordnlp package
which work only with Python 3.6+.
* Provid a frame agnostic API to test nn modules on both CPU and CUDA side.
1. make dgl.nn.xxx frame agnostic
2. make test.backend include dgl.nn modules
3. modify test_edge_softmax of test/mxnet/test_nn.py and
test/pytorch/test_nn.py work on both CPU and GPU
* Fix style
* Delete unused code
* Make agnostic test only related to tests/backend
1. clear all agnostic related code in dgl.nn
2. make test_graph_conv agnostic to cpu/gpu
* Fix code style
* fix
* doc
* Make all test code under tests.mxnet/pytorch.test_nn.py
work on both CPU and GPU.
* Fix syntex
* Remove rand
* Add TAGCN nn.module and example
* Now tagcn can run on CPU.
* Add unitest for TGConv
* Fix style
* For pubmed dataset, using --lr=0.005 can achieve better acc
* Fix style
* Fix some descriptions
* trigger
* Fix doc
* Add nn.TGConv and example
* Fix bug
* Update data in mxnet.tagcn test acc.
* Fix some comments and code
* delete useless code
* Fix namming
* Fix bug
* Fix bug
* Add test for mxnet TAGCov
* Add test code for mxnet TAGCov
* Update some docs
* Fix some code
* Update docs dgl.nn.mxnet
* Update weight init
* Fix
* reproduce the bug
* Fix concurrency bug reported at #755 .
Also make test_shared_mem_store.py more deterministic.
* Update test_shared_mem_store.py
* Update dmlc/core
* networkx >= 2.4 will break our examples
* Update tutorials/requirements
* fix selfloop edges
* upd version
2019-10-29 23:34:31 -04:00
Chao Ma
ff9f67ee0d
Send any shape of tensor rather than matrix ( #942 )
2019-10-21 17:27:03 +08:00
Minjie Wang
9737b2700f
[Model][Hetero] GCMC using new hetero APIs ( #860 )
...
* init
* rm data
* README
* fix rating values that are not decimal
* rm stale codes
* small fix
* upd
* rewrite decoder
* fix many
* many fix; performance matched
* upd; handle sparse input
* upd
* address comments
* more docstring; download data automatically
* shared param mode
2019-09-26 17:50:38 -04:00
Chao Ma
7782276962
[KVStore] Distributed kvstore ( #851 )
...
* update
* speedup
* add some comments
2019-09-11 14:54:50 +08:00
Zihao Ye
6a4b5ae98a
[Feature] Edge softmax on a subset of edges in the graph. ( #842 )
...
* upd
* add test
* fix
* upd
* merge
* hotfix
* upd
* fix
2019-09-09 13:44:56 +08:00
xiang song(charlie.song)
e17add5602
[NN] Add MXNet impl for TAGCN module. ( #799 )
...
* upd
* fig edgebatch edges
* add test
* trigger
* Update README.md for pytorch PinSage example.
Add noting that the PinSage model example under
example/pytorch/recommendation only work with Python 3.6+
as its dataset loader depends on stanfordnlp package
which work only with Python 3.6+.
* Provid a frame agnostic API to test nn modules on both CPU and CUDA side.
1. make dgl.nn.xxx frame agnostic
2. make test.backend include dgl.nn modules
3. modify test_edge_softmax of test/mxnet/test_nn.py and
test/pytorch/test_nn.py work on both CPU and GPU
* Fix style
* Delete unused code
* Make agnostic test only related to tests/backend
1. clear all agnostic related code in dgl.nn
2. make test_graph_conv agnostic to cpu/gpu
* Fix code style
* fix
* doc
* Make all test code under tests.mxnet/pytorch.test_nn.py
work on both CPU and GPU.
* Fix syntex
* Remove rand
* Add TAGCN nn.module and example
* Now tagcn can run on CPU.
* Add unitest for TGConv
* Fix style
* For pubmed dataset, using --lr=0.005 can achieve better acc
* Fix style
* Fix some descriptions
* trigger
* Fix doc
* Add nn.TGConv and example
* Fix bug
* Update data in mxnet.tagcn test acc.
* Fix some comments and code
* delete useless code
* Fix namming
* Fix bug
* Fix bug
* Add test code for mxnet TAGCov
* Update some docs
* Fix some code
* Update docs dgl.nn.mxnet
* Update weight init
* Fix
2019-08-28 13:19:17 +08:00
Zihao Ye
9314aabd1f
[Refactor] Interface of nn modules ( #798 )
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* refactor
* upd mpnn
2019-08-27 22:29:25 +08:00
Minjie Wang
708765f0a1
[NN] RGCN modules ( #744 )
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* rgcn module
* support id input
* WIP: model codes
* use faster index select
* dropout
* self loop
* WIP: link prediction
* fix lint
* WIP: docs
* docstring
* docstring
* merge two child classes
* mxnet rgcn module
* fix lint
* fix lint
* fix rename bug
* add uniform edge sampler
* fix fn name
* docstring
* fix mxnet rgcn module
* fix mx rgcn
* enable test on cuda
2019-08-23 16:38:48 -04:00
VoVAllen
0f12763725
[Model] Early stop GAT ( #750 )
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* Add early stop
* add mxnet version
* Poke ci
2019-08-21 14:58:56 +08:00
Da Zheng
94ecb8eb96
[BUGFIX] copy graph index to shared memory. ( #634 )
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* copy graph index to shared memory.
* fix.
* fix.
* fix.
* use a diff name for in-csr and out-csr.
* fix lint.
* remove print.
* add test.
* add comments.
2019-06-12 01:32:25 -07:00
Da Zheng
411bcd7e6c
[BUGFIX] extand DGLGraph graph_data. ( #632 )
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* enable tutorial test in CI.
* extand DGLGraph graph_data.
* update doc.
* Revert "enable tutorial test in CI."
This reverts commit cd774067180922bb6ae979bde4aecbffc61c8147.
* accept DGLGraph in graph store.
2019-06-09 17:22:04 -07:00
Da Zheng
fc7775a20f
Define node/edge Ids in NodeFlow more clearly ( #628 )
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* add tests.
* distinguish layer-local nid and nodeflow nid.
* use numpy assert_array_equal and assert_allclose
* fix map_from_parent_nid
* fix test
* fix test.
* renmae remap.
* update doc.
* update doc.
* update doc.
* fix test.
* fix test.
2019-06-09 12:10:07 -07:00
Minjie Wang
dec8b49b5d
[Examples] Run all the examples ( #623 )
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* all pytorch examples
* scan through mxnet examples
* change reddit data
* tweak numerical range for unittest
* fix ci
* fix ci
* fix
* add seed to workaround
2019-06-09 00:26:13 -04:00
Lingfan Yu
74e13eea61
[Model] Update GAT model code ( #622 )
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* fix gat code to use latest edge softmax module
* avoid transpose
* update README
* use edge_softmax op
* mxnet edge softmax op
* mxnet gat
* update README
* fix unittest
* fix ci
* fix mxnet nn test; relax criteria for prod reducer
2019-06-08 21:41:38 -04:00
Minjie Wang
01a4cc5b7b
[Graph] Add API to convert graph to simple graph ( #587 )
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* to simple
* WIP: multigraph flag
* graph index refactor; pass basic testing
* graph index refactor; pass basic testing
* fix bug in to_simple; pass torch test
* fix mx utest
* fix example
* fix lint
* fix ci
* poke ci
* poke ci
* WIP
* poke ci
* poke ci
* poke ci
* change ci workspace
* poke ci
* poke ci
* poke ci
* poke ci
* delete ci
* use enum for multigraph flag
2019-06-01 23:32:46 -04:00
Chao Ma
e0ce190dfe
[Doc] Update README.MD of demo for distributed sampler ( #579 )
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* Update README.md for the demo of distributed sampler
* Update README.MD of demo for distributed sampler
2019-05-30 01:24:13 -04:00