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作者 SHA1 备注 提交日期
Mufei Li 877101a96b [Doc] Update Doc for UDFs (#2131) 
* Update Doc for UDFs

* add degree bucketing explanation

* Update udf.rst

* Update

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
 2020-09-13 04:57:06 +08:00
Minjie Wang 22167f7203 [Refactor] Enable new kernel in all message passing APIs (#1953) 
* WIP: frame refactor

* new frame

* simple update_all builtin

* move all subgraph routines into the same file

* sddmm & spmm schedule; node & edge udf

* degree bucketing

* some tricky 0deg corner cases

* bug in frame append

* merge test_hetero_basics and test_basics

* some code rearange

* fix test_heterograph

* add mean spmm

* enable all builtin combinations

* pass gpu test

* pass pytorch tests

* wip

* fix some pt debugging codes

* fix bug in mxnet backward

* pass all mxnet utests

* passed tf tests

* docstring

* lint

* lint

* fix broadcasting bugs

* add warning and clamp for mean reducer

* add test for zero-degree mean

* address comments

* lint

* small fix
 2020-08-07 15:40:25 +08:00
Quan (Andy) Gan c7c0fd0e37 [Feature] Accessing node/edge types in UDFs. (#1243) 
* typed udf

* docstrings
 2020-02-17 16:02:56 +08:00
Minjie Wang 9b4d60799a [Hetero] New syntax (#824) 
* WIP. remove graph arg in NodeBatch and EdgeBatch

* refactor: use graph adapter for scheduler

* WIP: recv

* draft impl

* stuck at bipartite

* bipartite->unitgraph; support dsttype == srctype

* pass test_query

* pass test_query

* pass test_view

* test apply

* pass udf message passing tests

* pass quan's test using builtins

* WIP: wildcard slicing

* new construct methods

* broken

* good

* add stack cross reducer

* fix bug; fix mx

* fix bug in csrmm2 when the CSR is not square

* lint

* removed FlattenedHeteroGraph class

* WIP

* prop nodes, prop edges, filter nodes/edges

* add DGLGraph tests to heterograph. Fix several bugs

* finish nx<->hetero graph conversion

* create bipartite from nx

* more spec on hetero/homo conversion

* silly fixes

* check node and edge types

* repr

* to api

* adj APIs

* inc

* fix some lints and bugs

* fix some lints

* hetero/homo conversion

* fix flatten test

* more spec in hetero_from_homo and test

* flatten using concat names

* WIP: creators

* rewrite hetero_from_homo in a more efficient way

* remove useless variables

* fix lint

* subgraphs and typed subgraphs

* lint & removed heterosubgraph class

* lint x2

* disable heterograph mutation test

* docstring update

* add edge id for nx graph test

* fix mx unittests

* fix bug

* try fix

* fix unittest when cross_reducer is stack

* fix ci

* fix nx bipartite bug; docstring

* fix scipy creation bug

* lint

* fix bug when converting heterograph from homograph

* fix bug in hetero_from_homo about ntype order

* trailing white

* docstring fixes for add_foo and data views

* docstring for relation slice

* to_hetero and to_homo with feature support

* lint

* lint

* DGLGraph compatibility

* incidence matrix & docstring fixes

* example string fixes

* feature in hetero_from_relations

* deduplication of edge types in to_hetero

* fix lint

* fix
 2019-09-17 15:41:57 -04:00
Zihao Ye 17b60e1af0 [Bugfix] EdgeBatch.edges call attempts tuple item assignment (#747) 
* upd

* fig edgebatch edges

* add test

* trigger
 2019-08-11 04:07:41 +08:00
Minjie Wang 4bd4d6e348 [Lint] Pylint (#330) 
* fix lint for graph_index.py

* pylint for base.py

* pylint for batched_graph.py

* pylint for frame.py; simplify and fix bugs in frame when index is slice type

* pylint for graph.py

* pylint for immutable_graph_index.py

* pylint for init.py

* pylint for rest files in root package

* pylint for _ffi package

* pylint for function package

* pylint for runtime package

* pylint for runtime.ir package

* add pylint to ci

* fix mx tests

* fix lint errors

* fix ci

* fix as requested

* fix lint
 2019-01-01 15:15:41 -05:00
Da Zheng 7aa494b3bc [Bugfix][Doc] explain the batch dimension in the doc and many fix (#266) 
* add more unit tests for mxnet.

* fix.

* explain the batch dimension.

* update doc.

* disable unit tests on DFS.

* fix graph traversal.
 2018-12-06 00:48:57 -05:00
Mufei Li 485f6d3abd [Doc] udf (#195) 
* Docstring for udf

* Track udf docs

* Improve

* Improved

* Delete udf.py

* Improve
 2018-11-30 00:38:58 -05:00
Minjie Wang 7241a9c008 [Backend] backend interface (#109) 
* backend interface

* small fix

* more comments to the data type dict

* WIP

* convert_to and narrow

* WIP

* pytorch and numpy backend; WIP on mxnet backend

* mxnet backend

* narrow

* Fix all usages

* fix for mx

* fix for mx

* fix mx

* fix mx

* fix mx

* fix mx

* fix mx

* fix mx

* fix mx

* revert jenkins

* add sparse_matrix api

* sparse matrix api

* some fixme

* Fix as requested
 2018-11-04 21:42:39 -05:00
Minjie Wang 68ec624782 [API][Doc] API change & basic tutorials (#113) 
* Add SH tutorials

* setup sphinx-gallery; work on graph tutorial

* draft dglgraph tutorial

* update readme to include document url

* rm obsolete file

* Draft the message passing tutorial

* Capsule code (#102)

* add capsule example

* clean code

* better naming

* better naming

* [GCN]tutorial scaffold

* fix capsule example code

* remove previous capsule example code

* graph struc edit

* modified:   2_graph.py

* update doc of capsule

* update capsule docs

* update capsule docs

* add msg passing prime

* GCN-GAT tutorial Section 1 and 2

* comment for API improvement

* section 3

* Tutorial API change (#115)

* change the API as discusses; toy example

* enable the new set/get syntax

* fixed pytorch utest

* fixed gcn example

* fixed gat example

* fixed mx utests

* fix mx utest

* delete apply edges; add utest for update_edges

* small change on toy example

* fix utest

* fix out in degrees bug

* update pagerank example and add it to CI

* add delitem for dataview

* make edges() return form that is compatible with send/update_edges etc

* fix index bug when the given data is one-int-tensor

* fix doc
 2018-11-02 17:19:14 -04:00