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0.5.x
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作者 SHA1 备注 提交日期
mszarma 45a54a2541 [Fix] Enable mini-batch rgcn for CPU (#2345) 2020-11-27 03:20:19 +00:00
Guo Qipeng aa5d222bd8 Fix a bug in the data loading of GraphWriter (#2343) 
In the bucket sampler, the length array should be recovered after random picking samples.
 2020-11-27 03:20:19 +00:00
Quan (Andy) Gan e751ff01c7 fix reddit self loop (#2330) 2020-11-27 03:20:07 +00:00
Lingfan Yu 2fc189a750 [Model] SIGN for OGB dataset (#2316) 
* sign for ogbn products, arxiv, mag

* texts

* fix

* update ogb folder readme

* use dgl nightly build

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2020-11-27 03:17:22 +00:00
chwan-rice 9e9fcdb32f [Fix] typo (#2265) 
* upd

* upd

* upd

* upd

* upd

* fix OpenMP compatibility issues

* typo

* partition

* misc

* fix typo

* num_parts=1

* import torch

* long

* print info

* print info

* print info

* upd

* remove debug code

* revert partition.py

* fix cut count

* fix cut count

* Revert "fix cut count"

This reverts commit 10926b4fd48f45c8f1ddb58be7db6c22e653effd.

* Revert "fix cut count"

This reverts commit 76465283bef093a2b4209ad70dd15d2437b2ec8a.

* type of deprecate

* typo in deprecate info

* fix typo

* use cv for partitioning

* CE

* no message

* revert

* typo

* no message

* no message

* no message

* practice

* dmlc-core

* DGLGraph

Co-authored-by: yzh119 <expye@outlook.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
 2020-11-27 03:17:12 +00:00
maqy1995 63284c08bb [Example] fix print info (#2305) 2020-11-27 03:17:12 +00:00
Quan (Andy) Gan d160bc3b43 [Bug] fix multiple bugs in JTNN example (#2220) 
* [Bug] fix multiple bugs in JTNN example

* remove debug code
 2020-11-27 03:17:12 +00:00
esang 34e31f8724 [Example]Add sparse embedding in GATNE-T example to support big graph (#2234) 
* add sparse and mutil gpu support

* update multi gpu

* update readme

* remove multi gpu

* add multiple gpus support

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
 2020-11-27 03:17:12 +00:00
Hao Xiong 7e5791ef32 [Example] Implement LINE with dgl and pytorch (#2195) 
* line

* two lines

* update readme

* readme

* update readme

* update

* Implement LINE

* readme

* readme

* typos

* update readme

Co-authored-by: Zihao Ye <expye@outlook.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
 2020-11-27 03:17:11 +00:00
espylapiza 66a2d16070 [Example] GAT on ogbn-arxiv (#2210) 
* [Example] GCN on ogbn-arxiv dataset

* Add README.md

* Update GCN implementation on ogbn-arxiv

* Update GCN on ogbn-arxiv

* Fix typo

* Use evaluator to get results

* Fix duplicated

* Fix duplicated

* Update GCN on ogbn-arxiv

* Add GAT for ogbn-arxiv

* Update README.md

* Update GAT on ogbn-arxiv

* Update README.md

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
 2020-11-27 03:17:11 +00:00
Mufei Li ad6b215bbd [Doc and User Guide] Minor Fix (#2206) 
* [Distributed Example] Check args.num_servers with DGL_NUM_SERVER (#2203)

* update

* update

* update

* Fix doc and user guide

* Update heterograph.py

Co-authored-by: Chao Ma <mctt90@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-13-9.us-west-2.compute.internal>
 2020-09-17 02:59:55 +08:00
Chao Ma c53bf77452 [Distributed Example] Add --close_profiler option to train_dist.py (#2199) 
* update

* update
 2020-09-15 14:37:28 +08:00
Qidong Su 0ced22c237 fix (#2142) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-10-127.us-west-2.compute.internal>
Co-authored-by: Chao Ma <mctt90@gmail.com>
 2020-09-15 14:19:16 +08:00
Hao Xiong 9488bace20 [Fix] fix some typos in example/ogb/deepwalk/ (#2190) 
* line

* two lines

* update readme

* readme

* update readme

* update

Co-authored-by: Zihao Ye <expye@outlook.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
 2020-09-15 11:01:44 +08:00
Chao Ma 1b2658b926 update (#2192) 2020-09-14 15:35:39 +08:00
Chao Ma 1aa25cb618 update (#2191) 2020-09-14 15:13:39 +08:00
xiang song(charlie.song) 782527d481 Fix partition for 0.5.1 (#2187) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-24-210.ec2.internal>
 2020-09-13 16:25:51 +08:00
Leo 55f3e92631 [Fix] use DistDataLoader instead of Pytorch’s DataLoader. (#2182) 
Co-authored-by: hzliuchw <hzliuchw@corp.netease.com>
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
 2020-09-12 20:08:39 +08:00
Jinjing Zhou 0afacfb873 Fix create_format_ to create_formats (#2184) 
* Update dgl.DGLGraph.rst

* Update gcn.py
 2020-09-12 14:44:30 +08:00
espylapiza 3659fb05e9 [Example] Fix duplicated (#2154) 
* [Example] GCN on ogbn-arxiv dataset

* Add README.md

* Update GCN implementation on ogbn-arxiv

* Update GCN on ogbn-arxiv

* Fix typo

* Use evaluator to get results

* Fix duplicated

* Fix duplicated

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
 2020-09-05 23:35:12 +08:00
espylapiza 036084f6b6 [Example] Update GCN on ogbn-arxiv dataset (#2153) 
* [Example] GCN on ogbn-arxiv dataset

* Add README.md

* Update GCN implementation on ogbn-arxiv

* Update GCN on ogbn-arxiv

* Fix typo

* Use evaluator to get results

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
 2020-09-05 20:07:50 +08:00
espylapiza 1a131f6b9d [Example] GCN on ogbn-arxiv dataset (#2146) 
* [Example] GCN on ogbn-arxiv dataset

* Add README.md

* Update GCN implementation on ogbn-arxiv

* Update GCN on ogbn-arxiv

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
 2020-09-04 15:00:45 +08:00
xiang song(charlie.song) 7e7376eb4a [Hotfix] Fix unsupervised graphsage (#2143) 
* hotfix

* Hotfix

Co-authored-by: Ubuntu <ubuntu@ip-172-31-87-240.ec2.internal>
 2020-09-03 11:11:15 +08:00
Chao Ma e8273a8510 update README.md (#2138) 2020-09-02 15:42:28 +08:00
xiang song(charlie.song) 1e3fcc7c53 update comments (#2132) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
 2020-08-31 13:23:43 +08:00
espylapiza 7993a4d8e3 [Example] GCN on ogbn-arxiv dataset (#2124) 
* [Example] GCN on ogbn-arxiv dataset

* Add README.md

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Zihao Ye <expye@outlook.com>
 2020-08-30 22:03:07 +08:00
Quan (Andy) Gan 9eaace9216 rename create_format_ to create_formats_ (#2126) 2020-08-29 22:49:27 +08:00
xiang song(charlie.song) 0435b74c48 [Hotfix] Fix layer norm (#2119) 
* hotfix

* Fix Layer Norm

Co-authored-by: Ubuntu <ubuntu@ip-172-31-87-240.ec2.internal>
 2020-08-28 11:20:33 +08:00
Chao Ma 4327d7125d [Distributed] Check num_workers and num_samplers (#2108) 
* check num_workers

* update

* update

* update

* update

* update

* update
 2020-08-27 12:42:25 +08:00
Chao Ma 283b2cfb96 [Distributed] Fix issues of GraphSage to support running on GPU (#2084) 
* fix issues on GPU

* update

* update

* update

* update

* update

* update

* update

* update

* update

Co-authored-by: Ma <manchao@38f9d3587685.ant.amazon.com>
 2020-08-25 13:20:46 +08:00
Quan (Andy) Gan 28deee4d47 [Model] fix PinSAGE example for 0.5 release (#2072) 2020-08-20 12:51:44 +08:00
Mufei Li dba8c82571 Fix (#2070) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
 2020-08-20 10:25:20 +08:00
xiang song(charlie.song) 8f3e423c74 update Readme (#2068) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
 2020-08-19 23:04:19 +08:00
Mufei Li 2b77ad41e1 [Example] Fix GCMC (#2067) 
* Fix

* Update data.py

* Update README.md

* Fix

Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
 2020-08-19 20:58:57 +08:00
Mufei Li 100d932865 Update (#2062) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
 2020-08-19 17:42:48 +08:00
Mufei Li a260a6e615 [Example] Fix GATNE-T (#2061) 
* Update README.md

* Update

* Fix

Co-authored-by: Ubuntu <ubuntu@ip-172-31-1-5.us-west-2.compute.internal>
 2020-08-19 17:01:56 +08:00
xiang song(charlie.song) 4c5136c8f8 deprecated some mxnet example (#2054) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
 2020-08-19 15:50:57 +08:00
Mufei Li 6e8f760518 Update (#2057) 2020-08-19 14:24:39 +08:00
xiang song(charlie.song) 4edde000a4 Fix tree lstm (#2052) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
 2020-08-19 10:44:10 +08:00
xiang song(charlie.song) f3f35098e6 Fix (#2051) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-63-129.ec2.internal>
 2020-08-19 08:45:29 +08:00
xiang song(charlie.song) 0052f1212b [Example] Rgcn distributed training (#1999) 
* add entity_classify_dist

* upd

* update

* Fix

* Fix

* upd

* upd

* upd

* upd

* global eval

* Fix

* Fix

* Fix

* Fix

* FIx

* upd

* upd

* update

* support pytorch sparse embedding

* Fix

* Fix

* update Readme

* update with new API

* Fix

* update Readme

* add fanout for validation neighbor sampling

Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-24-210.ec2.internal>
Co-authored-by: Chao Ma <mctt90@gmail.com>
Co-authored-by: Da Zheng <zhengda1936@gmail.com>
 2020-08-18 12:12:21 -07:00
xiang song(charlie.song) 3d65484323 Fix mxnet gin (#2048) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
 2020-08-19 00:05:15 +08:00
Mufei Li 9088c63592 [Feature] Change the Default Value of transpose in DGLGraph.adj (#2046) 
* Update adj

* Fix
 2020-08-18 22:45:46 +08:00
Quan (Andy) Gan edfbee2ca8 [Feature] Make sample_neighbors copy features on demand (#2042) 
* fix

* fix

* lint

* fix

* test

* fix

* fix
 2020-08-18 22:25:19 +08:00
xiang song(charlie.song) 09ec6020ac [Example] rm gcn spmv (#2044) 
* rm gcn spmv

* remove useless test

* remove useless test

Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
 2020-08-18 17:48:38 +08:00
Zihao Ye 6d34628101 upd (#2043) 2020-08-18 17:15:31 +08:00
xiang song(charlie.song) 1a1f38e3fe remove kvstore example which is not maintianed and is out of date (#2041) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-51-214.ec2.internal>
 2020-08-18 15:09:21 +08:00
Quan (Andy) Gan 6367318f45 [Model] use dask to parallelize preprocessing (#2040) 2020-08-18 12:12:50 +08:00
Mufei Li be444e52d9 [Doc/Feature] Refactor, doc update and behavior fix for graphs (#1983) 
* Update graph

* Fix for dgl.graph

* from_scipy

* Replace canonical_etypes with relations

* from_networkx

* Update for hetero_from_relations

* Roll back the change of canonical_etypes to relations

* heterograph

* bipartite

* Update doc

* Fix lint

* Fix lint

* Fix test cases

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Update

* Fix test

* Fix

* Update

* Use DGLError

* Update

* Update

* Update

* Update

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* rewrite sanity checks

* delete unnecessary checks

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Update

* Update

* Update

* Fix

* Fix

* Fix

* Update

* Fix

* Update

* Fix

* Fix

* Update

* Fix

* Update

* Fix

Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: Quan Gan <coin2028@hotmail.com>
 2020-08-18 04:26:29 +08:00
Tianjun Xiao b1e69105d4 [Doc] API Doc update for mxnet and tf, remove some degree check (#2028) 
* mx tf relconv

* use method instead of private attr

* src and dst have different fc for gat

* update edgeconv

* change sage and sgconv

* no degree check on gin

* add remainding API doc

* fix pylint

* infer fc_src and fc_dst, only one tensor for block

* fix pytest
 2020-08-17 13:23:44 +08:00