文件历史

9 次代码提交

作者 SHA1 备注 提交日期
Da Zheng 929742b588 [Feature] Reimplement Immutable graph index in DGL (#342)
* init.

* it's compiled.

* add immutable graph constructor.

* add immutable graph API.

* fix.

* impl get adjacency matrix.

* fix.

* fix graph_index from scipy matrix.

* add neighbor sampling.

* remap vertex ids.

* fix.

* move sampler test.

* fix tests.

* add comments

* remove mxnet-specific immutable graph.

* fix.

* fix lint.

* fix.

* try to fix windows compile error.

* fix.

* fix.

* add test.

* unify Graph and ImmutableGraph.

* fix bugs.

* fix compile.

* move immutable graph.

* fix.

* remove print.

* fix lint.

* fix

* fix lint.

* fix lint.

* fix test.

* fix comments.

* merge GraphIndex and ImmutableGraphIndex.

* temp fix.

* impl GetAdj.

* fix lint

* fix.

* fix.

* fix.

* fix.

* fix.

* use csr only for readonly graph.

* Revert "use csr only for readonly graph."

This reverts commit 8e24bb033af8504531b22849de5b7567b168e0d5.

* remove code.

* fix.

* fix.

* fix.

* fix.

* fix.

* fix.

* address comments.

* fix for comments.

* fix comments.

* revert.

* move test_graph_index to compute.

* fix.

* fix.

* impl GetAdj for coo.

* fix.

* fix tests.

* address comments.

* address comments.

* fix comment.

* address comments.

* use lambda.

* other comments.

* address comments.

* modify the semantics of edges.

* fix order.

* use DGLIdIter

* fix.

* remove NotImplemented.

* revert some code.
2019-01-17 09:59:53 +08:00
brett koonce 707334ce85 minor spelling tweaks (#349)
* minor spelling tweaks

* Update CONTRIBUTORS.md
2019-01-10 12:02:31 -05:00
Quan (Andy) Gan e19cd62ecd [Test] Unify tests for different backends (#333)
* test basics

* batched graph & filter, mxnet filter fix

* frame and function; bugfix

* test graph adj and inc matrices

* fixing start = 0 for mxnet

* test index

* inplace update & line graph

* multi send recv

* more tests

* oops

* more tests

* removing old test files; readonly graphs for mxnet still kept

* modifying test scripts

* adding a placeholder for pytorch to reserve directory

* torch 0.4.1 compat fixes

* moving backend out of compute to avoid nose detection

* tests guide

* mx sparse-to-dense/sparse-to-numpy is buggy

* oops

* contribution guide for unit tests

* printing incmat

* printing dlpack

* small push

* typo

* fixing duplicate entries that causes undefined behavior

* move equal comparison to backend
2019-01-05 23:32:33 -05:00
Lingfan Yu 2664ed2dff [Bugfix] Fix multiple send recv (#320)
* fix bug: frame append should check itself

* more test case

* fix multi-send-recv bug

* remv msg graph and clean up

* test cases

* more test case

* fix for batchedgraph

* fix bugs: converting from a graph with edges

* fix

* add more operators to utils.Index

* clear frame executor

* change message indicator to a graph level index

* fix test cases

* guard the case that mxnet does not support concat zero shape tensor

* fix bug: avoid convert full slice to numpy

* test multi-send-recv after conversion

* fix as request (partially)

* add dtype, ctx to full_1d

* add slice data to utils.Index

* fix

* more doc string

* fix as requested
2018-12-23 21:35:49 -05:00
Minjie Wang eafcb7e7f5 [Bugfix][MXNet] Fix edge order and builtin max bug in mx (#247)
* Fix edge order and builtin max bug in mx

* fix as requested
2018-12-05 01:32:54 -08:00
Da Zheng a5a35d1f7a [Sampler] improve random shuffle performance in sampler (#228)
* fix.

* make it generic.

* add the API.

* fix.

* remove mxnet.
2018-12-04 09:24:32 -08:00
Minjie Wang 048f6d7a30 [GraphIndex] refactor graph caching (#150)
* refactor graph caching

* fix mx test

* fix typo
2018-11-13 22:12:38 -05:00
Gan Quan 40ca5de450 [API] Readout interfaces (#124)
* fixing builtin src*edge shape mismatch

* bundled function refactor (?)

* fixing names

* readout prototype

* oops

* more fixes

* removing readout prototype

* sum_on() with SPMV, fixing batching with 0 edges

* readouts with segmented sum

* typo (??????)

* fixes NLTK dependency (#125)

* misc fixes including #126 (pushing again)

* sanity check for mxnet

* fixes NLTK dependency (#125) and #126

* reverting to sum_nodes/edges
2018-11-10 11:35:34 -05:00
Minjie Wang 7241a9c008 [Backend] backend interface (#109)
* backend interface

* small fix

* more comments to the data type dict

* WIP

* convert_to and narrow

* WIP

* pytorch and numpy backend; WIP on mxnet backend

* mxnet backend

* narrow

* Fix all usages

* fix for mx

* fix for mx

* fix mx

* fix mx

* fix mx

* fix mx

* fix mx

* fix mx

* fix mx

* revert jenkins

* add sparse_matrix api

* sparse matrix api

* some fixme

* Fix as requested
2018-11-04 21:42:39 -05:00