文件历史

9 次代码提交

作者 SHA1 备注 提交日期
Minjie Wang 4dfe7547e8 Fix num_rows bug in batched_graph (#169) 2018-11-23 02:49:59 +08:00
Lingfan Yu deb653f8dc [Runtime] Scheduler and Executor (#140)
* executor api

* draft executor interface

* WIP

* revert changes to avoid conflict with api change

* core scheduling logic

* WIP: build graph adj

* incidence matrix for in edges

* support incidence matrix for partial recv nodes

* improve

* build adjmat in scheduler

* graph store

* get degree bucketing schedule

* connect to c++ degree bucketing

* conceptual executor creation code

* executor comments

* fix

* more executor comments

* WIP: full send_and_recv schedule

* most schedulers

* simplify scheduler

* executors

* runtime

* builtin function base class

* adj indices and shape

* completely refactor scheduler

* rename and move bundled out to function.py

* use_edge_feature in msg func

* rewrite scheduler

* node edge executor

* connect with graph api

* handle zero degree

* misc

* fix test cases

* fix a good many bugs...

* remove old scheduler

* push and pull

* fix send recv

* c++ lint

* fix batched send recv

* hot fix for mxnet

* typo

* write back executor

* apply node edge

* clean up, doc string

* fix as requested

* refactor

* fix

* WIP

* WIP

* ir draft

* more on ir

* WIP: spmv schedule

* WIP

* recv schedule

* refactor

* WIP

* snr degree bucketing

* snr scheduler

* move prog to graph.py; rename

* unittest for send/recv

* remove some legacy codes

* WIP: update_all

* pass test_basics

* passed all current utests

* more utests; fix mx utest

* WIP: fixing zero deg initial value

* some tests

* fix 0deg problem

* fix mx

* fix mx

* some notes

* fix as requested
2018-11-22 12:15:50 -05:00
Minjie Wang 3e43d7b8d2 [Test] Lower allclose precision (#129) 2018-11-08 22:52:22 -05:00
GaiYu0 2319167444 [API] Graph traversal (#103)
* bfs, dfs and topological traversal

* dfs and test cases

* Conflicts:
	python/dgl/graph.py
	src/graph/graph.cc
	src/graph/graph_op.cc

* documentation

* requested changes

* Conflicts:
	Jenkinsfile
	examples/pytorch/gcn/gcn.py
	examples/pytorch/gcn/gcn_spmv.py
	python/dgl/graph.py
	python/dgl/graph_index.py
	src/graph/graph.cc
	src/graph/graph_op.cc

* Conflicts:
	Jenkinsfile
	python/dgl/graph_index.py

* fix lint errors

* fix lint errors

* fix lint errors

* fix test cases

* requested changes

* traversal interface

* [Bug] fixed a typo that caused syntax error (#120)

* WIP

* bfs nodes generator works

* topological traversal

* WIP: dfs_edges

* dfs edges

* dfs labeled edges

* utest for traversal

* fix lint

* fix utest

* code clean

* changes as requested
2018-11-08 10:14:19 -05:00
Minjie Wang 68ec624782 [API][Doc] API change & basic tutorials (#113)
* Add SH tutorials

* setup sphinx-gallery; work on graph tutorial

* draft dglgraph tutorial

* update readme to include document url

* rm obsolete file

* Draft the message passing tutorial

* Capsule code (#102)

* add capsule example

* clean code

* better naming

* better naming

* [GCN]tutorial scaffold

* fix capsule example code

* remove previous capsule example code

* graph struc edit

* modified:   2_graph.py

* update doc of capsule

* update capsule docs

* update capsule docs

* add msg passing prime

* GCN-GAT tutorial Section 1 and 2

* comment for API improvement

* section 3

* Tutorial API change (#115)

* change the API as discusses; toy example

* enable the new set/get syntax

* fixed pytorch utest

* fixed gcn example

* fixed gat example

* fixed mx utests

* fix mx utest

* delete apply edges; add utest for update_edges

* small change on toy example

* fix utest

* fix out in degrees bug

* update pagerank example and add it to CI

* add delitem for dataview

* make edges() return form that is compatible with send/update_edges etc

* fix index bug when the given data is one-int-tensor

* fix doc
2018-11-02 17:19:14 -04:00
Minjie Wang 3e76bcc052 remove anonymous repr 2018-10-18 21:43:40 -04:00
Minjie Wang 6cbdf37c37 Merge branch 'master' into cpp 2018-10-18 15:29:20 -04:00
Lingfan Yu cdf7334cc6 Dockerfile and CI (#74)
* Test CPP branch CI (#2)

* Fix batching node-only graphs (#62)

* fixing batching with graphs with no edges

* oops forgot test

* fix readme

* Docker and Jenkins (#1)

* docker ci cpu

* install python packages

* docker ci gpu

* add readme

* use dgl cpu image

* run command in container as root

* use python3

* fix test case

* remove nose from docker file

* docker folder readme

* parallelize cpu and gpu

* top level stages

* comment out python2 related installation

* fix

* remove igraph

* building for cpp

* change building order

* export env in test stage

* withEnv

* run docker container as root

* fix test cases

* fix test cases

* minor

* remove old build
2018-10-07 19:18:43 -04:00
Minjie Wang 1b06998465 doc for batched graph 2018-10-05 15:07:42 -04:00